LOCUS BC032453 2393 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sec1 family domain containing 2, mRNA (cDNA clone
MGC:40484 IMAGE:5176029), complete cds.
ACCESSION BC032453
VERSION BC032453.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2393)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2393)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255253.
FEATURES Location/Qualifiers
source 1..2393
/db_xref="H-InvDB:HIT000041544"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40484 IMAGE:5176029"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2393
/gene="SCFD2"
/gene_synonym="FLJ39514"
/gene_synonym="STXBP1L1"
/db_xref="GeneID:152579"
/db_xref="HGNC:HGNC:30676"
CDS 133..2187
/gene="SCFD2"
/gene_synonym="FLJ39514"
/gene_synonym="STXBP1L1"
/codon_start=1
/product="sec1 family domain containing 2"
/protein_id="AAH32453.1"
/db_xref="GeneID:152579"
/db_xref="HGNC:HGNC:30676"
/translation="MSASGVLSFTQQGWEQVLAKVKRAVVYLDAACAESLHWGCGSTR
LLEAVGGPDCHLREFEPDAIGGGAKQPKAVFVLSCLLKGRTVEILRDIICRSHFQYCV
VVTTVSHAVHLTANHVPAAAAAEMEGQQPVFEQLEEKLCEWMGNMNYTAEVFHVPLLL
APVAPHFALTPAFASLFPLLPQDVHLLNSARPDKRKLGSLGDVDSTTLTPELLLQIRC
LVSGLSSLCEHLGVREECFAVGSLSQVIAADLANYAPAKNRKKTAAGRASVVFVDRTL
DLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVNMIALTALHTEEENYNVVAPGCLSQ
SSDTTAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLMSYIQL
FKNNLKALMNHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSVVLNQ
LLPMIKPVTQRTNEDYSPEELLILLIYIYSVTGELTVDKDLCEAEEKVKKALAQVFCE
ESGLSPLLQKITDWDSSINLTFHKSKIAVDELFTSLRDIAGARSLLKQFKSVYVPGNH
THQASYKPLLKQVVEEIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYP
LLILFVVGGVTVSEVKMVKDLVASLKPGTQVIVLSTRLLKPLNIPELLFATDRLHPDL
GF"
BASE COUNT 613 a 604 c 610 g 566 t
ORIGIN
1 agggagcgtg tcagaggccg accacgtgta ctgtggagac tgtcaaagtc tcccggagcc
61 caatttccgg aagcggtgag ttctgaaaga agttcctgca ccgtagtttc ccaagtctgc
121 gaatccccaa tcatgagcgc ctcgggcgta ctgtccttta cccagcaagg atgggagcag
181 gtgctggcca aagtgaaacg ggctgtggtt tacctggacg ccgcctgcgc cgagagcctg
241 cactggggct gcggatccac ccgtctcctg gaggcggtgg ggggtcctga ctgtcacctg
301 cgagagttcg agcccgacgc aattggtggt ggagccaagc agcccaaggc agtgtttgtg
361 ctgagctgcc tgctgaaagg ccggaccgtg gagatcctac gggacatcat ctgccgcagt
421 cacttccagt attgtgtggt ggtcacaacc gtgagccacg ctgtccacct cacagctaat
481 catgtcccag cggcggcagc ggccgagatg gaggggcagc agccggtgtt cgagcagctg
541 gaggagaagc tgtgtgaatg gatgggcaac atgaactaca cggccgaggt gttccatgtc
601 ccgttattgc ttgcccctgt tgctccccac tttgccttga ctccagcttt tgcatccctt
661 ttcccactgc taccccagga tgtgcacctc cttaatagcg cccgaccgga caagaggaag
721 ctgggaagcc tgggtgatgt ggactccact acgctaaccc cagagctgct gctgcagatc
781 agatgcctag tgtcaggcct cagttctctg tgtgaacatt taggagtacg ggaggagtgt
841 tttgctgtag gttccttaag tcaggtcatc gctgcggatc tggccaatta tgcccctgca
901 aagaacagga agaagactgc tgcaggcagg gcatcagtgg tttttgtgga cagaaccctg
961 gatctcacag gagcagttgg acatcatgga gacaacttag tagagaagat catttcagca
1021 cttccccagc tcccaggcca cacaaatgat gtgatggtta acatgatagc gctcactgca
1081 ctccatactg aggaggaaaa ttataatgtg gttgcaccag gctgtctttc acaatccagt
1141 gacaccacag ccaaagccct atgggaagct ttactgaaca ctaagcacaa agaggcagtg
1201 atggaagttc ggagacatct agtggaagcg gcaagcagag aaaacctgcc aatcaagatg
1261 agtatgggga gagtcacacc gggacagctc atgtcctata ttcagctctt caagaacaac
1321 ctcaaagctc taatgaatca ttgtggcctc ctccagcttg gactggccac agctcaaacg
1381 ttgaaacacc cacagactgc caagtgggac aactttctgg cttttgaaag gctccttctt
1441 cagagcattg gggagtcagc aatgtccgtt gtgttaaatc agctgctgcc catgattaag
1501 cctgtaaccc agagaaccaa cgaggactac agccctgagg aactgctgat ccttctcata
1561 tatatttatt ctgtcactgg agagctcaca gtagacaaag acctgtgtga agcagaagaa
1621 aaagtcaaga aagcattggc tcaggtcttc tgtgaggaat ctggattgtc acctttgctg
1681 caaaaaatta cggactggga ctcttcaatt aatctgacat ttcacaaatc caaaattgcc
1741 gtggatgaac tctttacttc acttcgggat attgctggag ctcggagtct cctgaaacag
1801 tttaagtctg tatatgttcc tggaaatcat acccaccagg catcttataa gccattgttg
1861 aagcaagttg tggaggaaat atttcatccc gagaggccag attccgttga tattgaacac
1921 atgtcttcag gcctcactga tctccttaaa actggattta gcatgttcat gaaggtgagc
1981 cggcctcatc ctagtgacta ccccctcctg atcctctttg tggtaggtgg ggtcacagtc
2041 tctgaagtga aaatggtcaa agatcttgtg gcatcgttga agccaggaac ccaggtaatc
2101 gtgctgtcca cacgactcct gaagccactt aacattcctg agctgttatt tgcaactgac
2161 cgactgcatc cagaccttgg cttctgagca tccgctaaga agataagacc tactcaagct
2221 ggaaatgccg atgcaatttt ctgccaccac tccaaatact cctccacaac cagcgtccct
2281 gtcactaatt gcgagaatga tggaattctg cctgaagggt cttgatacct actcagtgag
2341 gtactttgct tggattgctg tgattcttaa aaaaaaaaaa aaaaaaaaaa aaa
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