LOCUS BC032424 779 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens NOP16 nucleolar protein homolog (yeast), mRNA (cDNA
clone MGC:40298 IMAGE:5416724), complete cds.
ACCESSION BC032424
VERSION BC032424.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 779)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 779)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC032424.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127554.
FEATURES Location/Qualifiers
source 1..779
/db_xref="H-InvDB:HIT000092651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40298 IMAGE:5416724"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..779
/gene="NOP16"
/gene_synonym="HSPC111"
/gene_synonym="HSPC185"
/db_xref="GeneID:51491"
/db_xref="HGNC:HGNC:26934"
CDS 32..730
/gene="NOP16"
/gene_synonym="HSPC111"
/gene_synonym="HSPC185"
/codon_start=1
/product="NOP16 protein"
/protein_id="AAH32424.1"
/db_xref="GeneID:51491"
/db_xref="HGNC:HGNC:26934"
/translation="MPKAKGKTRRQKFGYSVNRKRLNRNARRKAAPRIECSHIRHAWD
HAKSVRQNLAEMGLAVDPNRAVPLRKRKVKAMEVDIEERPKELVRKPYVLNDLEAEAS
LPEKKGNTLSRDLIDYVRYMVENHGEDYKQSGKTSSILCRRGRWRWSDWFTSQLPQAE
ASPGPVKLEPGCKARRCCVAPEELARSHGIRRLHTHVHTPRSGEGTVLRGSNLYSSGG
SRKSQNLLFSGWVM"
BASE COUNT 216 a 176 c 243 g 144 t
ORIGIN
1 ggacgcgtgg gctggtgcgg tggtcagcgc gatgcccaag gccaagggca aaacccggag
61 gcagaagttt ggttacagtg tcaaccgaaa gcgtctgaac cggaatgctc gacggaaggc
121 agcgccgcgg atcgaatgct cccacatccg acatgcctgg gaccacgcta aatcggtacg
181 gcagaacctg gccgagatgg ggttggctgt ggaccccaac agggcggtgc ccctccgtaa
241 gagaaaggtg aaggccatgg aggtggacat agaggagagg cctaaagagc ttgtacggaa
301 gccctatgtg ctgaatgacc tggaggcaga agccagcctt ccagaaaaga aaggaaatac
361 tctgtctcgg gacctcattg actatgtacg ctacatggta gagaaccacg gggaggacta
421 taagcagagt ggcaagactt cctcgattct ttgcagaaga ggaagatgga ggtggagtga
481 ctggtttaca tcacagctgc cccaggctga ggcgtccccc ggaccagtga agctggagcc
541 agggtgtaag gcaaggaggt gctgtgtggc tccagaggag ctggccaggt cccatggaat
601 cagaaggtta cacacacacg tgcacactcc ccgctctggg gaaggaactg ttctcagagg
661 ctccaattta tattcatctg ggggttcacg gaaaagccag aacctgctgt tttcagggtg
721 ggtgatgtaa atatagtgtg tacataataa agcaaatata ttttaaaaaa aaaaaaaaa
//