LOCUS BC032365 3114 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SH2 domain containing 3C, mRNA (cDNA clone MGC:40418 IMAGE:4521962), complete cds. ACCESSION BC032365 VERSION BC032365.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3114) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3114) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 64 Row: b Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41281820. FEATURES Location/Qualifiers source 1..3114 /db_xref="H-InvDB:HIT000041512" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40418 IMAGE:4521962" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3114 /gene="SH2D3C" /gene_synonym="CHAT" /gene_synonym="NSP3" /gene_synonym="PRO34088" /db_xref="GeneID:10044" /db_xref="HGNC:HGNC:16884" /db_xref="MIM:604722" CDS 18..2600 /gene="SH2D3C" /gene_synonym="CHAT" /gene_synonym="NSP3" /gene_synonym="PRO34088" /codon_start=1 /product="SH2 domain containing 3C" /protein_id="AAH32365.1" /db_xref="GeneID:10044" /db_xref="HGNC:HGNC:16884" /db_xref="MIM:604722" /translation="MTEGTKKTSKKFKFFKFKGFGSLSNLPRSFTLRRSSASISRQSH LEPDTFEATQDDMVTVPKSPPAYARSSDMYSHMGTMPRPSIKKAQNSQAARQAQEAGP KPNLVPGGVPDPPGLEAAKEVMVKATGPLEDTPAMEPNPSAVEVDPIRKPEVPTGDVE EERPPRDVHSERAAGEPEAGSDYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSH AWYHGRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQALHFKINKVVVKAGE SYTHIQYLFEQESFDHVPALVRYHVGSRKAVSEQSGAIIYCPVNRTFPLRYLEASYGL GQGSSKPASPVSPSGPKGSHMKRRSVTMTDGLTADKVTRSDGCPTSTSLPRPRDSIRS CALSMDQIPDLHSPMSPISESPSSPAYSTVTRVHAAPAAPSATALPASPVARRSSEPQ LCPGSAPKTHGESDKGPHTSPSHTLGKASPSPSLSSYSDPDSGHYCQLQPPVRGSREW AATETSSQQARSYGERLKELSENGAPEGDWGKTFTVPIVEVTSSFNPATFQSLLIPRD NRPLEVGLLRKVKELLAEVDARTLARHVTKVDCLVARILGVTKEMQTLMGVRWGMELL TLPHGRQLRLDLLERFHTMSIMLAVDILGCTGSAEERAALLHKTIQLAAELRGTMGNM FSFAAVMGALDMAQISRLEQTWVTLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLSN TTFPHVLPLITLLECDSAPPEGPEPWGSTEHGVEVVLAHLEAARTVAHHGGLYHTNAE VKLQGFQARPELLEVFSTEFQMRLLWGSQGASSSQARRYEKFDKVLTALSHKLEPAVR SSEL" BASE COUNT 735 a 1005 c 842 g 532 t ORIGIN 1 ccacgcgtcc ggccaagatg acagagggga ccaagaagac cagcaaaaag ttcaagttct 61 tcaagttcaa gggctttggg agtctctcca acctccctcg gtccttcact ctgagacgat 121 cctcagcttc catcagtagg cagtcccatt tggagcctga cacctttgaa gccacgcagg 181 atgacatggt gacggtgccc aagagtcccc cagcctatgc ccgctccagt gacatgtaca 241 gccacatggg caccatgcct cgccccagca tcaagaaagc acagaactca caggctgccc 301 ggcaggccca ggaggcgggt cccaagccca acttggtacc cggaggtgta cccgaccccc 361 caggcttgga ggcagccaaa gaggtgatgg tgaaggccac tggccctcta gaggacaccc 421 cagcaatgga acccaaccct tcagcagtgg aggtagaccc catcagaaag cctgaggtcc 481 ccacaggaga cgtagaagag gagagacctc ccagggacgt gcactcagaa agggctgctg 541 gagagccaga ggctggcagc gactatgtga agttctccaa ggagaagtac atcctggact 601 catcgccaga gaaactccac aaggaattgg aggaggagct caaactcagc agcacggatc 661 tccgcagcca tgcctggtac catggccgca tcccccgaga ggtctcggag accttggtac 721 aacgcaacgg cgacttcctc atccgggact cactcaccag cctgggcgac tatgtgctca 781 cgtgccgctg gcgcaaccag gccttgcact tcaagatcaa caaggtggtg gtgaaggcag 841 gcgagagcta cacacacatc cagtacctgt ttgagcagga gagctttgac cacgtgcccg 901 ccctcgtgcg ctatcatgtg ggcagccgca aggctgtgtc agagcagagt ggtgccatca 961 tctactgccc ggtgaaccgc accttcccac tgcgctacct cgaggccagc tatggcctgg 1021 gacaggggag tagcaagcct gctagccccg tcagcccctc aggccccaag ggcagccaca 1081 tgaagcggcg cagcgtcacc atgaccgatg ggctcactgc tgacaaggtc acccgcagcg 1141 atggctgccc caccagtacg tcgctgcccc gccctcggga ctccatccgc agctgtgccc 1201 tcagcatgga ccagatccca gacctgcact cacccatgtc gcccatctcc gagagcccta 1261 gctcccctgc ctacagcact gtaacccgtg tccatgccgc ccctgcagcc ccttctgcca 1321 cagcattgcc tgcctcccct gtcgcccgcc gttccagtga gccccagctg tgtcccggaa 1381 gtgccccaaa gacccatggg gagtcagaca agggccccca caccagcccc tcccacaccc 1441 ttggcaaggc ctccccgtca ccatcactca gcagctacag tgacccggac tctggccact 1501 actgccagct ccagcctccc gtgcgtggca gccgagagtg ggcagcgact gagacctcca 1561 gccagcaggc caggagctat ggggagaggc taaaggaact gtcagaaaat ggggcccctg 1621 aaggggactg gggcaagacc ttcacagtcc ccatcgtgga agtcacttct tccttcaacc 1681 cggccacctt ccagtcacta ctgatcccca gggataaccg gccactggag gtgggccttc 1741 tgcgcaaggt caaggagctg ctggcagaag tggatgcccg gacgctggcc cggcatgtca 1801 ccaaggtgga ctgcctggtt gctaggatac tgggcgttac caaggagatg cagaccctaa 1861 tgggagtccg ctggggcatg gaactgctca ccctccccca tggccggcag ctacgcctag 1921 acctgctgga aaggttccac accatgtcca tcatgctggc cgtggacatc ctgggctgca 1981 ccggctctgc ggaggagcgg gcagcgctgc tgcacaagac cattcagctg gcggccgagc 2041 tgcgggggac tatgggcaac atgttcagct tcgcggcggt catgggtgcc ctggacatgg 2101 ctcagatttc tcggctggag cagacatggg tgaccctgcg gcagcgacac acagagggtg 2161 ccatcctgta cgagaagaag ctcaagcctt ttctcaagag cctcaacgag ggcaaagaag 2221 gcccgccgct gagcaacacc acgtttcctc atgtgctgcc cctcatcacc ctgctggagt 2281 gtgactcggc cccaccagag ggccctgagc cctggggcag cacggagcac ggcgtggagg 2341 tggtgctggc tcacctggag gccgcccgca cagtggcaca ccacggaggc ctgtaccaca 2401 ccaatgctga agtcaagctg caggggttcc aggcccggcc ggagctcctg gaggtgttca 2461 gcacggagtt ccagatgcgc cttctctggg gcagtcaggg tgccagcagc agccaggccc 2521 ggcgctatga gaagttcgac aaggtcctca ctgccctgtc ccacaagctg gaacctgctg 2581 tccgctccag cgagctgtga ccccagggac atttcccctc tgcagctgcg gacagcgtca 2641 ggggcagagg ggcacacaac tttccccaga gcaccccaag gacactgtga tcaacccgag 2701 aatgttctgg gttcaactca agcatctccc ttgcacctcc agggtcctgc gtggactctg 2761 ggttccatcc cacctgctac atgctcacca ggtctccatt gaggaagaac aggaacgccg 2821 gttcccccac cagcttttgc tgctcccctt cctgctgggg ttccctgttt tcgagccatg 2881 ggaggcaggc tgctcacgcc tcctcactct ctgtctgtcc ctcaccaaca ccaaggcctc 2941 catctcactg taaataagtc tctgttctgt aaatagatgt acagaagcca tgttatttct 3001 ttcatataat aaacttttat gactcttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //