LOCUS BC032297 3309 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens tripartite motif-containing 26, mRNA (cDNA clone
MGC:40232 IMAGE:4938971), complete cds.
ACCESSION BC032297
VERSION BC032297.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3309)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3309)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60279912.
FEATURES Location/Qualifiers
source 1..3309
/db_xref="H-InvDB:HIT000041470_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40232 IMAGE:4938971"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3309
/gene="TRIM26"
/gene_synonym="AFP"
/gene_synonym="RNF95"
/db_xref="GeneID:7726"
/db_xref="HGNC:HGNC:12962"
/db_xref="MIM:600830"
CDS 203..1822
/gene="TRIM26"
/gene_synonym="AFP"
/gene_synonym="RNF95"
/codon_start=1
/product="TRIM26 protein"
/protein_id="AAH32297.1"
/db_xref="GeneID:7726"
/db_xref="HGNC:HGNC:12962"
/db_xref="MIM:600830"
/translation="MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVR
PISGSRPVCPLCKKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLC
ERHREKLHYYCEDDGKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDR
DKIQGFQAKGEADILAALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELT
EGREKFKSRGVGELARLALVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIA
RVVKKKTGEFSDKLLSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKC
VTYTSLYKSAYLHPQQFDCEPGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEG
EEEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKG
DLSLRPEDGVWALRLSSSGIWANTSPEAELFPALRPRRVGIALDYEGGTVTFTNAESQ
ELIYTFTATFTRRLVPFLWLKWPGTRLLLRP"
BASE COUNT 827 a 902 c 922 g 658 t
ORIGIN
1 ccacgcgtcc ggtgccggcc gggattcgcg gcccggagct cgggaccggt tgcttcattc
61 cagcctcgca gtcacctctg tgccctgctg gttgtcttcc cagcgctgct gtagttgcct
121 tccatggatc tataggagag caagtcctcc aggagaagaa gtcctcacca gtgaacggag
181 acctctctga actaaggata ccatggccac gtcagcccca ctacggagcc tggaagagga
241 ggtgacctgc tccatctgtc ttgattacct gcgggaccct gtgaccattg actgtggcca
301 cgtcttctgc cgcagctgca ccacagacgt ccgccccatc tcagggagcc gccccgtctg
361 cccactctgc aagaagcctt ttaagaagga gaacatccga cccgtgtggc aactggccag
421 cctggtggag aacattgagc ggctgaaggt ggacaagggc aggcagccgg gagaggtgac
481 ccgggagcag caggatgcaa agttgtgcga gcgacaccga gagaagctgc actactactg
541 tgaggacgac gggaagctgc tgtgcgtgat gtgccgggag tcccgggagc acaggcccca
601 cacggccgtc ctcatggaga aggccgccca gccccacagg gaaaaaatcc tgaaccacct
661 gagtacccta aggagggaca gagacaaaat tcagggcttc caggcaaagg gagaagctga
721 tatcctggcc gcgctgaaga agctccagga ccagaggcag tacattgtgg ctgagtttga
781 gcagggtcat cagttcctga gggagcggga ggaacacctg ctggaacagc tggcgaagct
841 ggagcaggag ctcacggagg gcagggagaa gttcaagagc cggggcgtcg gggagcttgc
901 ccggctggcc ctggtcatct ccgaactgga gggcaaggcg cagcagccag ctgcagagct
961 catgcaggac acgagagact tcctaaacag gtatccacgg aagaagttct gggttgggaa
1021 acccattgct cgagtggtta aaaaaaagac cggagaattc tcagataaac tcctctctct
1081 gcaacgaggc ctgagggaat tccaggggaa gctgctgaga gacttggaat ataagacagt
1141 gagcgtcacc ctggacccac agtcggccag tgggtacctg cagctgtcag aggactggaa
1201 gtgcgtgacc tacaccagcc tgtacaagag tgcctacctg cacccccagc agtttgactg
1261 tgagcctggg gtgctaggca gcaagggctt cacctggggc aaggtctact gggaagtgga
1321 agtggagagg gagggctggt ctgaggatga agaagagggg gatgaggagg aagagggaga
1381 agaggaggag gaggaagagg aggccggcta tggggatgga tatgacgact gggaaacgga
1441 cgaagatgag gaatcgttgg gcgatgaaga ggaagaagag gaggaggaag aggaggaagt
1501 tctggaaagc tgcatggtgg gggtggctag agactctgtg aagaggaagg gagacctctc
1561 cctgcggcca gaggatggcg tgtgggcgct gcgcctctcc tcctccggca tctgggccaa
1621 caccagcccc gaggctgagc ttttcccagc actgcggccc cggagagtgg gcatcgccct
1681 ggattatgaa gggggcaccg tgactttcac caacgcagag tcacaggaac tcatctacac
1741 cttcactgcc accttcaccc ggcgcctggt ccccttcctg tggctcaagt ggccaggaac
1801 acgcctcctg ctaagaccct gagccctgac atctgccccc agccccaacc ctcagatgct
1861 tcacttcttt ggaattccag gactctcaat ggggggacgg gatgcctggc ctaagcacct
1921 ggagcagggg accccatatc cactggtagc cacctcccca ttgctgtggc cccctgaaat
1981 ctcactcagt gctgttgctc catctactgc cctaatgggg ctcttttccc acctcctgct
2041 ggtttcccga gggaacttct gaccctggag tccatgaggg ctcctttcct ttttgaccac
2101 gaccttggcc ccagctctgc actctctgga ataagggccc gatgcagcat tttcttgccc
2161 agtgtggcaa gacctcagaa aaaccagtca attacgccta agatcatttt gctgtcctta
2221 aaccccccag gttccttctt gcacaaatcc actctgctgc ccaccttccc tggcatttta
2281 aacagaccta ccccacccca actcagagtt aagcatacat ggcaatgctg aaaataaaca
2341 aaatccactg aggcttccca ggccatttaa agcctggagt accagcgcat atcatctcat
2401 ggggtccaga gtggagtcca ggcttctctg aaaccagggc tgagcatatt tccatagcca
2461 aggaggtggg actccctgga gctatctgtg gtcttaggga aggatccaga catacacggc
2521 tttggggtac aagctgtgat cactgatcaa taaattatct ctagattggt ccttgtgagg
2581 ggagttttaa gaatccagaa catcttgctc ttgatcagca catccaaaaa caccaagaca
2641 aacatccagt ggagcagaac ctctcctgcc tcgggagttc tgaccgggtt ccccagcagg
2701 gtgttaagcc tctgtctctg gccctaccag catccaggtt ccactttcct aggagagagt
2761 ggagatggga agacagggaa aggaaggcag caggaggcca caagcccacc aggtcttcat
2821 gtcaagagag ggagtaacat gtcttctcat tgcccacgga cccaacctct gtccaggtgc
2881 ccctcatcat cacagtttaa cacaagctcc cctgctccag ccaaattgat ctcccagtct
2941 tgtccttacc cattccaagt gctctgccag cccctgttca tccaagtttt aagtcctcca
3001 ccctgttcta agagactgtt ccaacggctc tgggcctcag tggtcacttg accaccattg
3061 tctcagagct gcccactttg tgtgtgtcac atgctgcctg agtcacatgt acatcttatt
3121 tctgcctcta gttttgtaag ctcctggagg gcggataaca tcttatacta ctcttgtatt
3181 ctcatggcac ctagtgcagt gctgggcaca gagtaggtgc tcaataaaga cttgttgaat
3241 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaaa
//