LOCUS BC032123 1156 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetratricopeptide repeat domain 9C, mRNA (cDNA clone
MGC:29649 IMAGE:4853202), complete cds.
ACCESSION BC032123
VERSION BC032123.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1156)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1156)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC032123.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222234.
FEATURES Location/Qualifiers
source 1..1156
/db_xref="H-InvDB:HIT000041431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29649 IMAGE:4853202"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1156
/gene="TTC9C"
/gene_synonym="MGC29649"
/db_xref="GeneID:283237"
/db_xref="HGNC:HGNC:28432"
CDS 370..885
/gene="TTC9C"
/gene_synonym="MGC29649"
/codon_start=1
/product="tetratricopeptide repeat domain 9C"
/protein_id="AAH32123.1"
/db_xref="GeneID:283237"
/db_xref="HGNC:HGNC:28432"
/translation="MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPS
LPSPLPNLGPQGPALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLE
RQPDNAKALYRAGVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHR
KEKQLYLGMFG"
BASE COUNT 313 a 299 c 264 g 280 t
ORIGIN
1 gaagccagtg tcccaggcgt tctcacgccc gcaacaattc ctgagtaggg ccttgcttga
61 gttcttcgga aagtctcatc cacccccaca tcgcctcttt aggaagtcac ttaatgttgg
121 gcttcattat tcccacatcc ctttccttac tacttgcctg cacttcttga gaaaaagact
181 gcagaaagga gaggtggggc tttcagtaga aacaagcaaa ccgcaggtcc ctgtgggggg
241 actctccagg aagaagggta atttcctgcc tccttaaatt ggctgctact gtcagttatt
301 ttgctcccaa ccccagagct tcacttgctc cttcacttcc cagttccgca agaaccgtgg
361 gcgacagtta tggagaagcg tctgcaggag gctcagctgt acaaggagga agggaaccag
421 cgctaccggg aagggaagta ccgagatgct gtgagtaggt accatcgagc tctgcttcag
481 ctgcggggtc tggatccgag tctgccctct ccgttaccta atctcggacc tcagggcccg
541 gccctcacgc ctgaacaaga aaacatattg cataccaccc agacagactg ctataacaat
601 ctagctgctt gtctccttca gatggagccc gtgaactacg aacgagtgag agaatatagt
661 cagaaagtcc tggaacgaca gcctgataat gccaaggcct tgtatcgggc cggagtggcc
721 tttttccatc tgcaggacta tgaccaggcc cgccactacc tcctggctgc cgtgaatagg
781 cagcctaaag atgccaacgt ccggcggtac ctccagctga cacagtcaga actcagcagc
841 taccatagaa aagagaagca gctctacctg ggcatgtttg gttaacaaag aagaaagatg
901 ctcctccagt tgaacttagg tggaccatta aacatgcatg aaggagaaat ctgagcctca
961 gcaagagaaa ttaaccctat acctctgacc caggtggatt tttgtttcta gttctgcaca
1021 aacttcacta cttagacagt ctgagtcttt ttctgtctat ccatctgttt atttctatac
1081 ctttcaatac atgttattgt tgcagatatt tggcttgaga aatataatca gaaaacataa
1141 aaaaaaaaaa aaaaaa
//