LOCUS BC032084 3489 bp mRNA linear HTC 15-JUL-2006
DEFINITION Homo sapiens gem (nuclear organelle) associated protein 4, mRNA
(cDNA clone IMAGE:4938956).
ACCESSION BC032084
VERSION BC032084.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3489)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: no 5' EST match.
FEATURES Location/Qualifiers
source 1..3489
/db_xref="H-InvDB:HIT000092567"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4938956"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 778 a 981 c 961 g 769 t
ORIGIN
1 ggcgttagcc ccgcgcagcc gccggcgtcg ccgccatgga cctaggaccc ttgaacatct
61 gtgaagaaat gactattctg catggaggct tcttgctggc cgagcagctg ttccacccta
121 aggcactggc agaattaaca aagtctgact gggaacgtgt tggacggccc atcgtggagg
181 ccttaaggga gatctcctcg gctgcagcac actcccagcc ctttgcctgg aagaagaaag
241 ccctgatcat catctgggcc aaggttctgc agccgcaccc cgtgaccccg tccgacacag
301 agacacggtg gcaggaagac ctgttcttct cggtgggcaa catgatcccc accatcaacc
361 acaccatcct cttcgagctg ctcaaatccc tggaagcttc tggactcttt atccagctcc
421 tgatggccct gcccaccacc atctgccatg cagaactaga gcgctttctg gaacatgtga
481 ccgttgacac ttctgccgaa gacgtggcct tcttcctgga cgtctggtgg gaggtgatga
541 agcacaaggg tcacccgcag gaccccctgc tctcccagtt tagtgcaatg gcccataagt
601 acctgcctgc cttagatgag ttcccccatc ctccaaagag gcttaggtca gacccagacg
661 cgtgccccac catgcccctg ttggccatgc tgctccgcgg gctgacacag atccagagtc
721 ggatcctggg cccggggagg aagtgctgtg cgctggccaa cctggctgac atgctgactg
781 tgtttgcgct gacagaggat gacccccagg aggtgtctgc aaccgtgtat ctggacaaac
841 tggccacggt gatctctgtg tggaactcgg acacccagaa tccctaccac cagcaggcgc
901 tggcagagaa ggtgaaggag gcagaacggg atgtcagcct gacctcgctg gccaaactcc
961 ccagtgagac cattttcgtg ggctgcgagt tcctgcacca cctgctgcgg gagtgggggg
1021 aggagttgca ggccgtgctc cgcagcagcc aggggacaag ttacgacagc taccggctgt
1081 gcgacagtct gacttccttc agccagaacg cgacgctcta cctgaaccgc accagcctgt
1141 ccaaggagga caggcaggtg gtctctgagc tggcggagtg tgtcagggac ttcctgagga
1201 aaacgagcac ggtgctgaag aacagggcct tggaggatat cacagcttcc attgccatgg
1261 ccgtcatcca gcagaagatg gaccgccata tggaagtgtg ctacattttt gcctctgaga
1321 agaagtgggc cttctcggac gagtgggtag cctgcctggg gagtaacagg gccctcttcc
1381 gagagccaga cttggtgttg aggctgctgg aaacagtgat agacgtcagc acagctgaca
1441 gagccatccc tgagtctcag atccggcagg tgatccacct gatcctggaa tgttacgcag
1501 acctctccct gccaggtaaa aataaagtcc ttgcaggtat cctgcgttcc tgggggcgaa
1561 agggcctctc tgaaaagttg ctggcttatg tggagggttt tcaggaagac ctcaatacaa
1621 cttttaacca gctcactcag agtgcctccg aacagggctt ggcaaaagct gtggcctccg
1681 tggcccgcct ggtcatagtg cacccggaag tcacggtgaa gaaaatgtgc agcctggctg
1741 tggtcaatct cggcacccac aagttcctgg gccagattct cactgccttc cctgccctta
1801 ggtttgtgga agagcagggt cccaattcat ctgccacttt catggtgtca tgcctcaaag
1861 aaaccgtctg gatgaagttc tctacaccca aggaagaaaa gcaattttta gagctcctga
1921 actgcctgat gagtcccgtg aaaccccaag ggattccagt ggctgctctt cttgagccag
1981 acgaggtgct gaaggaattt gtcctgcctt tcttgaggtt agatgttgaa gaggtagacc
2041 tcagtctgag gatcttcatc cagactctag aggcaaacgc gtgccgagag gaatactggc
2101 tccagacctg ctccccgttt ccactcctct tcagcttgtg ccagctcttg gaccgcttca
2161 gcaaatactg gcagcttccc aaggagaagc ggtgcctctc tttggatagg aaggatctag
2221 cgatccatat cctggagctc ctgtgtgaga ctgtatcagc caatgctgag accttctccc
2281 cggatgtctg gatcaagtcc ctgtcctggc tccaccgcaa gttagaacag ctagactgga
2341 ctgtgggcct gaggctgaag agcttcttcg aggggcactt caagtgtgaa gtgccagcca
2401 cactttttga gatctgtaag ctttcagaag acgagtggac ctcccaggcc cacccagggt
2461 acggggctgg cacggggctc ctggcctgga tggagtgctg ctgcgtctcc agcggcatct
2521 cggagaggat gctgtctctc ttggtggtgg acgtgggcaa tcctgaggag gtcagactgt
2581 tcagcaaagg ctttctggtg gccctggtgc aagtcatgcc ttggtgcagc cctcaggagt
2641 ggcagcgcct tcaccagctg accaggagac tgctggagaa gcagctcctc catgtccctt
2701 atagcctgga atatattcag tttgttcccc tgctcaacct gaagcccttt gcccaggagt
2761 tgcaactctc cgtcctcttc ctgaggactt tccagtttct ctgcagccat agctgtcgta
2821 attggcttcc tctggaaggc tggaaccacg tggtcaaact cctctgtggc agtctgaccc
2881 gcctcctgga ctcagtcagg gcgatacagg cagctggccc ttgggttcaa ggaccagagc
2941 aggacctgac ccaggaagcc ctgtttgttt acacccaggt gttctgccat gctctgcaca
3001 tcatggccat gctccacccg gaggtctgtg agccactcta cgttttagcc ttggaaaccc
3061 tcacctgcta tgagactttg agcaagacca acccttctgt cagctccttg ctccagaggg
3121 cacacgagca gtgcttctta aagtccattg ctgagggcat cggccctgaa gaacggcgcc
3181 aaaccctgtt gcagaagatg agcagcttct gacttggcgt ggggagctgg gccccaacat
3241 ggcgggtctg cagaagatca gcagcttctt acctgtgcgg gagcgaaaaa gctgggcttc
3301 aacatggcag gtctgtaggg gtcagacccg agcagcctgg actttacagt tatgtgaaac
3361 tgtccacaaa aagtcatggc aataatggtg taaagaaaat agtttcttgg gtatttgtaa
3421 cgtacaaact atcataaaaa ttctcctctt tcgcatctca aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaa
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