LOCUS BC032009 2023 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycerophosphodiester phosphodiesterase domain
containing 2, mRNA (cDNA clone MGC:21156 IMAGE:4747934), complete
cds.
ACCESSION BC032009
VERSION BC032009.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2023)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2023)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361648
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..2023
/db_xref="H-InvDB:HIT000041410"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21156 IMAGE:4747934"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2023
/gene="GDPD2"
/gene_synonym="FLJ20207"
/gene_synonym="GDE3"
/gene_synonym="OBDPF"
/db_xref="GeneID:54857"
/db_xref="HGNC:HGNC:25974"
CDS 59..1678
/gene="GDPD2"
/gene_synonym="FLJ20207"
/gene_synonym="GDE3"
/gene_synonym="OBDPF"
/codon_start=1
/product="glycerophosphodiester phosphodiesterase domain
containing 2"
/protein_id="AAH32009.1"
/db_xref="GeneID:54857"
/db_xref="HGNC:HGNC:25974"
/translation="MAESPGCCSVWARCLHCLYSCHWRKCPRERMQTSKCDCIWFGLL
FLTFLLSLSWLYIGLVLLNDLHNFNEFLFRRWGHWMDWSLAFLLVISLLVTYASLLLV
LALLLRLCRQPLHLHSLHKVLLLLIMLLVAAGLVGLDIQWQQEWHSLRVSLQATAPFL
HIGAAAGIALLAWPVADTFYRIHRRGPKILLLLLFFGVVLVIYLAPLCISSPCIMEPR
DLPPKPGLVGHRGAPMLAPENTLMSLRKTAECGATVFETDVMVSSDGVPFLMHDEHLS
RTTNVASVFPTRITAHSSDFSWTELKRLNAGSWFLERRPFWGAKPLAGPDQKEAESQT
VPALEELLEEAAALNLSIMFDLRRPPQNHTYYDTFVIQTLETVLNARVPQAMVFWLPD
EDRANVQRRAPGMRQIYGRQGGNRTERPQFLNLPYQDLPLLDIKALHKDNVSVNLFVV
NKPWLFSLLWCAGVDSVTTNDCQLLQQMRYPIWLITPQTYLIIWVITNCVSTMLLLWT
FLLQRRFVKKRGKTGLETAVLLTRINNFMME"
BASE COUNT 483 a 548 c 523 g 469 t
ORIGIN
1 gggaagcagt gcagagagga gagcggagcg gagctgccgc tgagcaaagg ccttcaccat
61 ggccgagtcc cccggctgct gctccgtctg ggcccgctgc ctccactgcc tgtatagctg
121 ccactggagg aaatgcccca gagagaggat gcaaaccagc aagtgcgact gtatctggtt
181 tggcctgctc ttcctcacct tcctcctttc cctgagctgg ctgtacatcg ggctcgtcct
241 tctcaatgac ctgcacaact tcaatgaatt cctcttccgc cgctggggac actggatgga
301 ctggtccctg gcattcctgc tggtcatctc tctactggtc acatatgcat ccttgctatt
361 ggtcctggcc ctgctcctgc ggctttgtag acagcccctg catctgcaca gcctccacaa
421 ggtgctgctg ctcctcatta tgctgcttgt ggcggctggc cttgtgggac tggacatcca
481 atggcagcag gagtggcata gcttgcgtgt gtcactgcag gccacagccc cattccttca
541 tattggagca gccgctggaa ttgccctcct ggcctggcct gtggctgata ccttctaccg
601 tatccaccga agaggtccca agattctgct actgctccta ttttttggag ttgtcctggt
661 catctacttg gcccccctat gcatctcctc accctgcatc atggaaccca gagacttacc
721 acccaagcct gggctggtgg gacaccgagg ggcccccatg ctggctcccg agaacaccct
781 gatgtccttg cggaagacag ctgaatgcgg agctactgtg tttgagactg atgtgatggt
841 cagctccgat ggggtcccct tcctcatgca tgatgagcac ctcagcagga ccacgaatgt
901 agcctctgta ttcccaaccc gaatcacagc ccacagcagt gacttctcct ggactgaact
961 gaagagactc aatgctggat cctggttcct agagaggcga cccttctggg gggccaaacc
1021 gctggcaggc cctgatcaga aagaggctga gagtcagacg gtaccagcat tagaagagct
1081 attggaggaa gctgcagccc tcaacctttc catcatgttc gacttgcgcc gacccccaca
1141 gaaccacaca tactatgaca cttttgtgat ccagacattg gagactgtgc tgaatgcaag
1201 ggtgccccaa gccatggtct tttggctacc agatgaagat cgggctaatg tccaacgacg
1261 ggcacctgga atgcgccaga tatatggacg tcagggaggc aacagaacgg agaggcccca
1321 gtttcttaac ctcccctatc aagatctgcc actattggat atcaaggcat tgcataagga
1381 taatgtctcg gtgaacctat ttgtagtgaa caagccctgg ctcttctctc tgctttggtg
1441 tgcaggggtg gattcggtca ccaccaacga ctgccagctg ctgcagcaga tgcgttaccc
1501 tatctggctt attacccctc aaacctacct aatcatatgg gtcattacca attgtgtttc
1561 caccatgctg cttttgtgga ccttcctcct ccaaaggaga tttgttaaga agagagggaa
1621 aactggctta gaaacagcag tgctgctgac aaggatcaac aatttcatga tggagtgaat
1681 gccctgccct gcttccccac ccaagccagt ctacattgcc caaacagcaa gggttggaga
1741 gtggcttaag tggaatgctt caggggtggt gggttgcaag tggggggagc tttgccaaca
1801 ggaggttttg aaccatgagg gccctctgcc caggtgatgg gcattcccta agctgctatg
1861 gaatctgctc cctttggggt tttgacctga gatgtttggg aagagagtga gtaatgagaa
1921 gtttctcctc aaatgaaact agaacagagg aagtaaaagg gagattgctc ggaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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