LOCUS BC032000 2284 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, DHHC-type containing 11, mRNA (cDNA clone
MGC:21040 IMAGE:4750082), complete cds.
ACCESSION BC032000
VERSION BC032000.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2284)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2284)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376149
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..2284
/db_xref="H-InvDB:HIT000041403"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21040 IMAGE:4750082"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2284
/gene="ZDHHC11"
/gene_synonym="FLJ13153"
/gene_synonym="ZNF399"
/db_xref="GeneID:79844"
/db_xref="HGNC:HGNC:19158"
CDS 4..1242
/gene="ZDHHC11"
/gene_synonym="FLJ13153"
/gene_synonym="ZNF399"
/codon_start=1
/product="zinc finger, DHHC-type containing 11"
/protein_id="AAH32000.1"
/db_xref="GeneID:79844"
/db_xref="HGNC:HGNC:19158"
/translation="MDTRSGSQCSVTPEAILNNEKLVLPPRISRVNGWSLPLHYFQVV
TWAVFVGLSSATFGIFIPFLPHAWKYIAYVVTGGIFSFHLVVHLIASCIDPADSNVRL
MKNYSQPMPLFDRSKHAHVIQNQFCHLCKVTVNKKTKHCISCNKCVSGFDHHCKWINN
CVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQYLVNPGVLRTDPRYEDVKNMNTWL
LFLPLFPVQVQTLIVVIIGMLVLLLDFLGLVHLGQLLIFHIYLKAKKMTTFEYLINNR
KEESSKHQAVRKDPYVQMDKGVLQQGAGALGSSAQGVKAKSSLLIHKHLCHFCTSVNQ
DGDSTAREGDEDPCPSALGAKARNSRLICRRLCQFSTRVHPDGGSMAQEADDAPSIST
LGLQQETTEPMKTDSAESED"
BASE COUNT 619 a 600 c 584 g 481 t
ORIGIN
1 cagatggaca cccgctccgg gagccagtgt tccgtcaccc cagaagccat actcaataat
61 gaaaagctgg tcttgccgcc ccgcatctcc agagtgaacg gctggtcgtt acccctgcac
121 tacttccagg tggtgacctg ggctgtcttc gtgggccttt cctcggccac cttcgggatc
181 ttcattccct tcctgcctca cgcgtggaaa tacattgcct acgtggtgac cggggggatc
241 ttctcgttcc acctcgtcgt ccacctgatc gcgtcctgca tcgacccggc cgactccaat
301 gtcagactca tgaagaacta ttctcagccc atgcccctct tcgacagatc aaaacatgca
361 cacgtgatcc agaatcagtt ctgccacctg tgcaaggtca ccgtgaacaa gaaaaccaaa
421 cactgcattt cctgcaataa gtgtgtgtcc ggcttcgacc accactgcaa atggatcaac
481 aactgcgtgg gaagccggaa ttattggttc ttcttcagca ctgtggcctc ggccacagct
541 ggcatgctct gcctgatcgc catcctgctg tatgtcctcg tccagtacct cgtgaacccc
601 ggggtgctcc gcacggaccc caggtatgaa gatgtcaaga atatgaacac gtggctgctg
661 ttcctccccc tgttcccggt gcaggtgcag accctgatag tcgtgatcat cgggatgctc
721 gtgctcctgc tggactttct tggcttggtg cacctgggcc agctgctcat cttccacatc
781 tacctgaagg ccaagaagat gaccaccttt gagtatctca ttaataaccg caaagaagag
841 agttcaaaac atcaagcagt gaggaaagat ccatacgtgc aaatggacaa aggagttctc
901 cagcaaggag ctggcgccct gggctcatct gcacagggag tcaaagccaa gagctccctg
961 ctgattcaca agcacttatg tcacttctgc acttcagtaa accaggatgg ggattcgacg
1021 gcacgggaag gggatgaaga cccgtgtcca tctgcacttg gagccaaggc caggaactcc
1081 cggctgattt gcaggcgcct gtgtcagttc tccactcgtg tacacccaga cgggggctcg
1141 atggcacagg aagcagatga tgccccgagt atatctacac ttgggctgca acaagaaaca
1201 acagagccca tgaaaactga cagtgctgaa agtgaagact gaaattcagg agctcaggtg
1261 cccctgtgat ccaggtcttc taccctgaaa ccccaccctc catcaaggtc ctgcctgtag
1321 agtctacctt gcaaagcctc ctgctcctac ccatgctaca ggccaggaac cagagcccat
1381 catctcagag gcccctggat gtccttcgaa ggaaccagga ccctcagagc ccagcatcca
1441 tctctgtcat catcttcatc acacccaaag aagagccagc cttgcaggag ggtttacatc
1501 tccaggaaga tgggctgcca gcaactgcag aggatgcagc cacctgctta actgtgctgt
1561 ccagccagcc agccagctgc agggcctctt gctgcttaag agctgatggg ccgggcatgt
1621 tggctcacac ctgtgagcac agtactggga aatgggagca cagtactagg aaatgggagc
1681 acagtactgg gaaatgggag cacagtactg ggaaatgggg gctcacagca ctgcaaaatg
1741 ggagcacagt attgggaaat gggagcacag tactgggaag tgggagcaca gtactgagaa
1801 gtgggagcac agtactgaga aatgggagta cactactgag aaatgggagc acagtactgg
1861 gaaatgggca tacagtactg ggaaatgggc atacagtact gagaaatggg agcacagtac
1921 tgggaaatgg gagcacagta ctgggaaatg ggagcccaca gtactgggaa aggggagttc
1981 acagtactcg gaaatgggag catagtactg ggaaatggga gcacagtact gggaaatggg
2041 agcatagtac tgggaaaccc cagacctgga ttctgagttt ttcagcctag cccagacttc
2101 ttatcttagt agacaaaaag agtcaatacc ggagaaccag aggcatcctc tgtattttaa
2161 tgaactctgc attttaatct gtttagtagt cattttttaa aagataatca gttttccaaa
2221 tatatctata agttactacg tgcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 aaaa
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