LOCUS BC031936 1956 bp mRNA linear HTC 18-MAR-2009
DEFINITION Homo sapiens hypothetical LOC285780, mRNA (cDNA clone
IMAGE:4819348), with apparent retained intron.
ACCESSION BC031936
VERSION BC031936.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1956)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1956)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: b Column: 24
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1956
/db_xref="H-InvDB:HIT000092476"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4819348"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 595 a 389 c 451 g 521 t
ORIGIN
1 agttgtgttc cagacagttt tatcatccac attgctgacc tggaagatgc atcattgtct
61 atgatatctg caatggaaat gatcactagg caatttcagc cttgcaaatc taactgtggc
121 gtgtggaaag aagaggaacc agaaaagaat gtttgtgaag ttctggcttg aatctcgtgc
181 cgggagtgtg aagaaggtcc ttgcttcccc ttcaccttct gccatgattc taagtttcct
241 gacgcctccc agccgtgctt cctgttaagc ctgtgaaact cctttggaat gagtacacat
301 ccaggagtga agaagacaag ctcaactgcc attctctgag cagttcaagg catactgagt
361 tgcgggagtt gtgtggtggt ccactctgac tgcaagcacc cctttcttga accgaacaga
421 gtcaagtgga atcaaaggac attacctgtt gattcttggg caaggcccag aatttggtgg
481 acatacttaa agaagaaagg aatcttcagc taaagtgtct acgatcaatt cagatttgga
541 gggcatggat cttctgacag taggggccat tctaggattt tttggttgaa gagatgaact
601 tcaacttggt tccagatggg tggtccagct attctgctga caacattttt cagggcaagg
661 cttttgctac tggaatgatt taaggaagat ccgtcagtgt ttcagagtaa agatatttct
721 aaagaagtac ctgtgtcatt gcccatcttg aagattgact tttatggatt gctcaaatac
781 tgatatcagc tcaatgtcaa tatatactcc tacatataaa atccatcttc taatcataat
841 cactaggttt taaccattta aggccatgag gtgtgaggtc ttttgagagt gaaagaactc
901 atattaatcc agctcctgac tcctaaaaaa acagtaactc ttgtaattaa aatgggcaga
961 gtccatcaag aagcagtgtc cagaagcact gggccatgtg gcgagcagca gtgtcaccag
1021 gaaacatgcc gagctgggtc aggaactgcc caaggaggag gagacactgc tcctgttgaa
1081 ggcagccctc gcatgacctg ctgaatcaca tcaaggttga agcattggcc ctccaatcaa
1141 tgattagttc tgggagaggg gatgaggtgc tgtcttctcc aacttctcca actgtgcctg
1201 aacagtcaca cgtcatgtca gtgcatatag agaatgaagc atcagtcaac caaactacgc
1261 tggagtggag catagagtcc tgtgacagaa gaggaggagg aagagaaaga agaatcagat
1321 ccctaaagga gggaaaaagc caggattcat tatacaaatt aaatttctaa gtctcaggct
1381 ctttctcccc aaggaaatca tcttgccatg agccctaggg cctgcttgaa tggagagcaa
1441 gaactatagg aggatgtgta gctgcaaaaa tttctcatca ataactcaat cttcagaacg
1501 ttatgacata cagaaaatca aagatgctgt gtcttagcat tgagcaatat gggtggtgct
1561 atgtctgtag tctggtcaaa ttcagtaact gtgttcaaaa caaaatttcc tctggaatac
1621 tattgagaaa atctggcatt tgcaaaaagg gcagagttta aatatgagcc agtctttcca
1681 atcaacaata cctcttttaa gaaaaccaac taacagctgt ttgcatgccg ttgaatcctt
1741 gtgagcagtt aggccacagt ctaggacaga aagatgacac ggggaaggac tgagggccat
1801 ctgagaacaa aagttgttgc tacttctcag aggcattgag acacactgca tgctgtagac
1861 tgctttgtgt aactgttatc acatcttgct tgagatgtca ttggcagaat gttcttaaaa
1921 ataaattata gataaatagc caaaaaaaaa aaaaaa
//