LOCUS BC031934 3624 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens ankyrin repeat and sterile alpha motif domain
containing 1A, mRNA (cDNA clone MGC:42354 IMAGE:4819948), complete
cds.
ACCESSION BC031934
VERSION BC031934.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3624)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3624)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38683796.
FEATURES Location/Qualifiers
source 1..3624
/db_xref="H-InvDB:HIT000333945"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42354 IMAGE:4819948"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3624
/gene="ANKS1A"
/gene_synonym="KIAA0229"
/db_xref="GeneID:23294"
/db_xref="HGNC:HGNC:20961"
/db_xref="MIM:608994"
CDS 1831..3543
/gene="ANKS1A"
/gene_synonym="KIAA0229"
/codon_start=1
/product="ANKS1A protein"
/protein_id="AAH31934.1"
/db_xref="GeneID:23294"
/db_xref="HGNC:HGNC:20961"
/db_xref="MIM:608994"
/translation="MSSIGEGIDFSQERQKISGSRTLEQSVGEWLESIGLQQYESKLL
LNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARSLPKVKALGYDGNSPPSVP
SWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVQLLGHRKRIIASLADRPY
EEPPQKPPRFSQLRCQDLLSQTSSQLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPA
APSRAERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSM
LIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRN
ISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLAL
QAQKSRATGASAAEMIETKSSKPVPKPRVGVRKSAVPLPPDSRCCYCHTCTTHRPSYL
PLPSVSPGVKLEPPDMDQDAQSHASVSWVVDPKPDSKRSLSTNHTRLELVCCSQPENE
LVSTISGDKPKSFLEPLLFVMPTTAYNHNCPEWRSQKDGGCSTSECPHHLCLEKPGVL
SLER"
BASE COUNT 911 a 1005 c 1016 g 692 t
ORIGIN
1 agggaggggg tggtgtcccc agccggtttg gggggtgcgt tgcccggaga cggaaagttt
61 gggagcccga gcaggctcgg ttgcagcctc ggggaggggg tccagcgggt ggcggccctg
121 gggatgggga aggagcagga gctgctggag gcggcccgca ccgggcacct cccggcggtg
181 gagaagctgc tgtccgggaa gcggctctcc tcaggctttg ggggcggcgg cggcggtggc
241 tctgggggcg gcggcggcgg cagcggcggc ggcggcggcg gcctcggctc ttccagccac
301 cccctctcca gtctgctcag aaatcaagct ccatgagggc agactttgtc tttttccatc
361 tgcatctcca gcccctagaa ggcgcacttc acgtgtctgc tgagtacatg ccatgtggag
421 agggccaaat gtgaactgtg ttgacagcac tggctacaca cccctgcacc atgctgcttt
481 gaatggccat aaggatgtgg tcgaggttct tctgaggaac gatgcgctga ccaacgtggc
541 tgactcaaaa ggctgctacc ctctgcattt ggcagcctgg aaaggagatg cccagatagt
601 gcggttgctc atccatcaag ggccttcaca caccagagtc aatgaacaga acaatgacaa
661 cgagacagcc ctgcattgtg cagcgcagta tggccacaca gaggtggtga aggtgctctt
721 agaggagctg acggacccca ccatgcgcaa caacaaattc gagacccctt tggacctggc
781 agcactgtat gggcgactgg aggtggtgaa aatgctcctt aatgcacacc ccaacctcct
841 gagctgcaac actaagaagc acacccctct gcacttggca gcaaggaatg gccacaaagc
901 cgtggtccag gtcctcctcg atgctggcat ggacagcaac taccagacgg agatgggcag
961 tgctttgcat gaggctgctt tgtttggcaa gaccgatgtg gtgcaaatcc tgctggctgc
1021 aggaactgac gtcaacataa aagataacca tggactgact gccctagaca ctgttcggga
1081 actgccttct caaaagagcc agcaaatagc agcattaatt gaagatcaca tgactggaaa
1141 aagaagtaca aaagaagtag ataaaacccc cccaccccag ccacctctca tctccagtat
1201 ggactccata tcacagaagt ctcagggtga cgtggagaaa gcagtgactg aactgattat
1261 agattttgat gcaaatgctg aagaagaggg tccctacgaa gctctgtata atgccatctc
1321 ctgccattcg ttggacagca tggccagcgg gcgatcatct gaccaagact ccacgaacaa
1381 ggaggctgag gcagcaggag tgaaacctgc tggagtgagg cctagggaac gtccaccacc
1441 tccagcaaag ccaccgcccg atgaagagga agaagaccac atagataaga agtattttcc
1501 cttgacagct tctgaggttc tgtccatgag acctaggatt catgggagtg cagcccggga
1561 agaagacgaa cacccttatg aactgttgtt aacagcagag acaaagaaag tggtgttggt
1621 ggatggaaaa acaaaaggct aagagaactg tcagaagccc atcagtctgg gaagaaaggg
1681 agcttcatgc ctggcctcct tgtggttagg aaggaaaatg gcccacacac ttaccaaatt
1741 aaggggctac tgccacgtgc gtccctgttg aagtgggaca gcacagtgct ctgcacagaa
1801 gccattctcc tgaaagagat tgagaaaatc atgagttcta ttggagaagg gattgacttt
1861 tctcaggaac ggcagaagat ctcaggttca cggacgctgg agcagagtgt cggggagtgg
1921 ctggagtcga ttgggctgca gcagtatgag agcaagttgc ttctgaatgg ctttgacgat
1981 gtccacttcc tggggtctaa tgtgatggaa gagcaggacc tgcgggacat cggcatcagc
2041 gacccacagc accggcggaa gctgctccag gcggcacgct ccctacccaa ggtgaaggct
2101 ctgggttatg acgggaacag cccccctagc gtgccctcct ggctggactc cctggggctg
2161 caggactacg tccattcctt cttgtcaagt ggttacagct ccattgacac cgtgaagaac
2221 ctctgggagc tagagctcgt caatgtcctg aaggtccagc tgctcggcca tcgcaagcgc
2281 atcatcgcct ccctcgcaga cagaccgtac gaggagccgc cccagaagcc ccccagattc
2341 tcccagctga ggtgccaaga tttgctctcc cagacgtcat cccaactgag tcagaatgat
2401 tcctgcactg ggcggtcggc agatctgctg ctgcctccag gggacacagg caggaggcgc
2461 catgacagtc tccatgaccc tgcggcaccc tcccgagcgg agcgcttcag gatccaggag
2521 gagcaccgtg aggccaagct gaccctgcgg cccccaagcc tggcagcccc ctacgcccca
2581 gtgcagagtt ggcaacacca gccagagaaa ctcatcttcg agtcctgtgg ttatgaagcc
2641 aattatctgg gctccatgct gatcaaagat ctgcgaggga cagaatccac gcaagacgcc
2701 tgtgccaaga tgcggaaatc tacggagcac atgaagaaga tccccaccat catcctgtcc
2761 atcacataca aaggtgtcaa gttcatcgat gcctccaaca agaacgtcat tgcagagcac
2821 gagatccgga acatttcctg tgcggcccag gacccggagg acctctgtac ctttgcctac
2881 atcaccaagg acctgcagac cagccaccac tattgccatg tgttcagcac cgtggatgtg
2941 aacctgacct acgagatcat cctgacgctg gggcaggcct tcgaagtggc ctatcagttg
3001 gccctgcagg cccagaagtc cagggcgacg ggcgcctctg cagctgagat gattgaaaca
3061 aaatcttcca aaccggtgcc taagcctcgg gtcggcgtga ggaaatccgc agtgccgctg
3121 ccccccgata gtcgctgttg ttactgtcac acctgcacca cccaccgtcc ttcctaccta
3181 ccgctgccat ctgttagtcc tggagtcaag ctggaaccac ctgatatgga ccaagatgcc
3241 caatcccatg ccagtgtctc ctgggttgtg gaccccaaac cagactctaa gcggagcctc
3301 agcaccaacc atactaggtt ggagctggtc tgctgcagtc agcctgaaaa tgagttggtc
3361 tctacaatct caggagacaa gcccaaatcc ttcctagaac ctctcttatt tgtgatgcca
3421 acaacagctt acaaccacaa ctgcccagaa tggagaagcc agaaggatgg aggctgctcc
3481 acctctgaat gcccacatca cctctgcctg gaaaaaccgg gtgttctaag cttagagaga
3541 tgagggaaag gagacttact gggctagaga acaggaccag aataaacttg atacaagtga
3601 gtcacagaaa aaaaaaaaaa aaaa
//