LOCUS BC031847 2857 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus nuclear VCP-like, mRNA (cDNA clone MGC:25549
IMAGE:3964470), complete cds.
ACCESSION BC031847
VERSION BC031847.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2857)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2857)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Gilbert Smith, Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 30 Row: e Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33468980.
FEATURES Location/Qualifiers
source 1..2857
/organism="Mus musculus"
/mol_type="mRNA"
/strain="FVB/N"
/db_xref="taxon:10090"
/clone="MGC:25549 IMAGE:3964470"
/tissue_type="Mammary tumor. Metallothionien-TGF alpha
model. 10 month old virgin mouse. Taken by biopsy."
/clone_lib="NCI_CGAP_Mam1"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2857
/gene="Nvl"
/db_xref="GeneID:67459"
/db_xref="MGI:MGI:1914709"
CDS 34..2601
/gene="Nvl"
/codon_start=1
/product="nuclear VCP-like"
/protein_id="AAH31847.1"
/db_xref="GeneID:67459"
/db_xref="MGI:MGI:1914709"
/translation="MKPRPGVFVDRKLKQRVIQYLSSNRCGKYVDTGILASDLQRLYS
VDYGRRKRNAFRIQVEKVFSIISSEKELKNLKELEDGHLAKRARQDEEDEYTESYSDD
DSNMEDYPDPQSANPMNSSLLSLYRRGNSESVSTTPKWGQREATTSTPLLTSKTGSVP
LKTPARESEGGWFIDKTPGGKKESLPLDLSDDQSNSKKQDSEIQILKDSSLLESDKKR
KGRAKGKGNKRKTENLQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEV
CKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV
SGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMD
DLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKL
RLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSE
GDQEKRLGAEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSA
KREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPG
CGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEV
DALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLD
KTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVRE
ASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPSISIKDQVMYEALQRSLSQ"
BASE COUNT 886 a 573 c 706 g 692 t
ORIGIN
1 taacaagagg cgcccgtgcg gggcagcagc atcatgaagc ctagacccgg ggttttcgta
61 gacaggaaac tgaagcagcg ggtcattcag tacctcagta gtaacagatg tggcaaatat
121 gtggacactg gaatcttagc atccgacttg caaagactgt acagtgtaga ttatggtcga
181 agaaaaagaa atgctttcag gattcaggta gaaaaagtat ttagcataat tagtagtgag
241 aaagaactta agaatcttaa agaactagaa gatggacatc tggcaaaaag agcaagacaa
301 gatgaagagg atgagtacac tgaaagctat tctgatgatg attcgaacat ggaagattac
361 ccagatccac agtcagcaaa tcccatgaac agctccctgc tctctttgta tcggagagga
421 aactcagagt ctgtttcaac cactccgaag tggggacaga gagaagccac cacttccaca
481 ccattgctga cgtctaaaac gggctccgtg ccattgaaga cccctgcccg agaatctgag
541 ggaggatggt ttattgacaa aactcccggt ggaaagaaag aaagtcttcc cttggaccta
601 tcagatgacc aaagcaactc taaaaagcag gattctgaga ttcagatttt aaaagactct
661 tctcttttgg aaagtgataa gaaaaggaaa ggtagggcaa agggcaaagg aaacaaaaga
721 aaaacagaga atcttcaaga agtagatgga gaaatagaag ctcttctgca aaagaaagcc
781 aaagcaagga gtacagagtt gcagatttcc aatgtgaagt ttgaagatgt tggaggcaat
841 gatgcaacat taaaagaagt ctgcaaaatg ctcatacaca tgcgccatcc agaggtatac
901 cagcaccttg gtgtcgtgcc ccctcgtgga gttctcctgc atggaccacc aggctgtggg
961 aagacattac ttgcacacgc aatagcaggg gaacttgact tgccgattct gaaagtggct
1021 gctccagaga ttgtgtccgg agtttctgga gagtctgagc agaagctccg tgagttattt
1081 gaccaggctg tgtcaaatgc accatgtatt gttttcattg atgaaattga tgcaattacc
1141 cccaaaagag aagttgcttc aaaagatatg gaacgaagaa ttgtagccca gcttctaacc
1201 tgcatggatg atctgaataa cgtggcagct acagctcggg tcctagttat tggagctact
1261 aacaggccag actcattgga tcctgctttg agacgtgcag gaaggtttga ccgagaagtc
1321 tgcttgggta tcccagatga ggcagccaga gaaagaattc tccaaacgtt gtgccgaaaa
1381 ctgaggcttc cggaaacttt taatttttgt cacttagcac acctaacacc aggctttgtt
1441 ggtgctgatc tgatggctct ttgccgagag gcggccatgt gtgcggtcaa tagggtcttg
1501 atgaaacaac aggcgcagca gaagaaaaag cctgagattg aaggtttgcc ctctgaagga
1561 gaccaggaga aaaggctggg agctgagccc acttctgaaa cacaggatga attgcaaagg
1621 ctgttggggt tgctaagaga ccaagatccc ctctcagagg aacagatgca aggactgtgc
1681 attgaattga acgatttcat tgttgctcta gcagaagtcc agccttctgc caaaagggaa
1741 ggctttgtaa ctgtccctaa tgtgacatgg gctgatattg gtgccctgga agatattaga
1801 gatgagctta taatggcaat attggcacct gttcgcaacc cagaccagtt cagaactctt
1861 ggtttgggga ctccagctgg catcctccta gctggtcctc ctgggtgtgg aaaaactctg
1921 ctagcaaagg ctgtggcaaa tgagtctgga ctaaatttta tatctgtcaa aggccctgaa
1981 ttattgaata tgtatgttgg tgagagtgaa cgtgctgttc gacaagtttt tcagcgagcc
2041 aagaactcag ccccctgcgt gatatttttt gatgaagtgg atgctttatg tcctcggaga
2101 tcagaccgag aaacaggtgc tagtgttcgt gtggtgaatc agctgcttac agagatggat
2161 ggcttagaaa cacgccagca agtttttatt ttggctgcca ccaatagacc agatatcatt
2221 gaccctgcca ttctgcgccc aggccgcctg gacaaaacgc tctttgtggg tttgcctccc
2281 ccagcagacc gtgttgccat attaaagact attacaaaaa atggcaccaa acctccactg
2341 gatgaagatg taaatttgga aacaattgct aatgaccttc gttgtaattg ctatacgggt
2401 gcggacctca ctgctctggt acgggaagct tctctctgtg ccctgagaca agaaataaca
2461 gctcagaaga atggtgttgg agcaggtgag cttaaggtca gtcataagca ctttgaagac
2521 gctttcaaga aagtaaaacc atccatatca ataaaggatc aagtgatgta tgaagctctg
2581 cagaggtccc tcagtcagtg atgtttgcgc tacctggcat ggaggaggtg tctagtgtgt
2641 ggaactcacc acgaatcaca gtcactctgg agggtctact ttcagcttga caccaatgat
2701 ccttttttat ttttttaaat cagaaccagt tatctcttta ttttttggaa agtaagttgg
2761 ctgtgttagt aaaaccacat ctgctagtgt gggctgataa aaaaaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//