LOCUS BC031820 2581 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens patatin-like phospholipase domain containing 5, mRNA
(cDNA clone MGC:24977 IMAGE:4778605), complete cds.
ACCESSION BC031820
VERSION BC031820.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2581)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2581)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jul 7, 2004 this sequence version replaced BC031820.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: l Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53828730.
FEATURES Location/Qualifiers
source 1..2581
/db_xref="H-InvDB:HIT000092442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24977 IMAGE:4778605"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2581
/gene="PNPLA5"
/gene_synonym="4833426H19Rik"
/gene_synonym="dJ388M5.4"
/gene_synonym="GS2L"
/db_xref="GeneID:150379"
/db_xref="HGNC:HGNC:24888"
CDS 98..1387
/gene="PNPLA5"
/gene_synonym="4833426H19Rik"
/gene_synonym="dJ388M5.4"
/gene_synonym="GS2L"
/codon_start=1
/product="patatin-like phospholipase domain containing 5"
/protein_id="AAH31820.1"
/db_xref="GeneID:150379"
/db_xref="HGNC:HGNC:24888"
/translation="MGFLEEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARR
IYGSSSGALNAVSIVCGKSVDFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQD
ALPPDAHVLASQRLGISLTRWPDGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPE
FRGERYIDGALSNNLPFADCPSTITVSPFHGTVDICPQSTSPNLHELNVFNFSFQIST
ENFFLGLICLIPPSLEVVADNCRQGYLDALRFLERRGLTKEPVLWTLVSKEPPAPADG
NWDAGCDQRWKGGLSLNWKVPHVQVKDVPNFEQLSPELEAALKKACTRDPSRWARFWH
SGPGQVLTYLLLPCTLPFEYIYFRSRRLVVWLPDVPADLWWMQGLLRNMALEVFSRTK
AQLLGPISPPATRVLETSPLQPQIAPHREELGPTHQA"
BASE COUNT 572 a 799 c 734 g 476 t
ORIGIN
1 atttgggccc agccccgtcc aaggctgcat cccggcccta tcccgggtca cggagtgacc
61 cttcctcgtc ccgatcaccc cgcccggtcc acccgccatg ggcttcttag aggaggaggg
121 cagatggaac ctgtccttct ccggcgccgg ctacctgggc gcccaccacg tgggcgccac
181 cgaatgcctg cgccagcgag ccccgcgcct cctccagggc gcccgccgca tctacggttc
241 ctcgtctggg gcgctcaacg cagtcagcat cgtctgcggc aagtcggtcg acttctgctg
301 ctcccacctc ctgggcatgg ttgggcagtt ggagcggctg agcctaagca tcctgcaccc
361 ggcctacgcg cccatcgagc acgtcaagca gcagctgcag gatgctctgc cccccgacgc
421 ccacgtcctg gcctcccagc ggctgggcat ttcgctgacc cgctggcctg acggacgcaa
481 cttcttggtc actgacttcg ccacctgcga tgagctcatc caggccttgg tctgcacctt
541 atactttcct ttctactgcg ggctgatccc ccccgagttc agaggggagc gctacatcga
601 tggggctctg agcaacaact tgccctttgc agactgcccc tccaccatca cggtgtcgcc
661 cttccatggg acagtggaca tctgccccca gagcacctcc cccaacctgc atgagctgaa
721 cgtcttcaac ttcagcttcc aaatctccac tgagaacttc ttcctggggc tcatatgtct
781 catacccccc agcctcgagg tagtggccga caactgcaga caaggctacc tggatgccct
841 gaggttcctg gagagacgtg gactcaccaa ggaaccagtg ctatggacgc tggtgtctaa
901 ggaaccccca gccccggctg acggaaactg ggatgctggc tgtgaccaac gctggaaggg
961 gggcctgtct ctcaactgga aagtgcccca tgtgcaagtc aaggatgtac ccaactttga
1021 gcagctctca ccagagctgg aggctgcact gaagaaagca tgtacgaggg atcccagccg
1081 gtgggcccgc ttctggcact cggggcctgg acaggtgctg acgtacctgc tgctaccctg
1141 cacactgccc ttcgagtaca tctacttccg cagcagaagg ttggtggtgt ggctgcccga
1201 tgtgccggcg gacttgtggt ggatgcaggg cctgctgagg aacatggccc tcgaggtttt
1261 ctccaggacc aaggcccagc tccttgggcc catcagccct ccggccactc gcgtcctgga
1321 aacaagcccc ctccaacccc agatagctcc tcatagagag gagctcgggc ccacccacca
1381 ggcctgaggg ggccgagcag ggccagccca gtgactggtg tcccttgatt cctgctctgg
1441 cctttgtcct gtgtgcccac atctgcccca gcgggaagag gccctgccaa tctccgtgga
1501 gaccctgcag cttggagccc gttccttggg gcgcagcctg tcagcatgtc cccggtcact
1561 gtgtacccag gtcacctgcc ctccctcttg ccccgtctca tcagggagag aaaggaggac
1621 agccacagag acacatgtct tactttcaga atttccacgg ggggactagg agggcagcat
1681 tgctggggag aggggctcct gttctgccgt ggagctgccc acggagcacc tcacagaaga
1741 ttgagaaagt gcctgatgcc cgcgtcagag accagaggag ccaactgaga tgatggggtg
1801 ggggtgctcc ccccagactt tctcagtcct gcagcggccc ttgggggtga cccccggcat
1861 ctaccccact caggaaacct tgacttctga attcctatca ggtccagagg gtggaaggcc
1921 ctggcaggaa gcaggaggag gaggagaggg gggtccaggt cttttcagga tcccagctgt
1981 gggtgcttct gttgggccca gtggcccctg ctatccccac agcctcattc ctgcagaagg
2041 tttgtgacgt agctgtgcct gtacctgggg cagagaggat gccagggaca ccaggcctct
2101 ggcctctcca cgagtcactg ctctccccat tggcagcacg ggacccatgc tgtgcccccg
2161 gccaggccct gaggaaatgc tcagcctcag tggagatggg gaggttagag agatggaggc
2221 gtgagtgaga acgggaagca aaggaataca cgtgggaact aaagagaaaa atgaccagcc
2281 tgggcagcat agcaagaccc tgtctctaaa aaaaataata aaaacttagc tgggcatggt
2341 ggtgcatgcc tgtggtcctg gctacttggg aggctgagga tggaggatca tttgagccca
2401 ggaggtcgag gctgcagtga accgtgatca cgccactgca ccccagccca ggcaacaaag
2461 tgagcccctg tctctaaata aataaagaga caataagcca ctcaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 a
//