LOCUS BC031686 2439 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens zinc finger protein 282, mRNA (cDNA clone
IMAGE:4932317), partial cds.
ACCESSION BC031686
VERSION BC031686.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2439)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: d Column: 1.
FEATURES Location/Qualifiers
source 1..2439
/db_xref="H-InvDB:HIT000092430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4932317"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2439
/gene="ZNF282"
/gene_synonym="HUB1"
/db_xref="GeneID:8427"
/db_xref="HGNC:HGNC:13076"
/db_xref="MIM:603397"
CDS <1..899
/gene="ZNF282"
/gene_synonym="HUB1"
/codon_start=3
/product="ZNF282 protein"
/protein_id="AAH31686.1"
/db_xref="GeneID:8427"
/db_xref="HGNC:HGNC:13076"
/db_xref="MIM:603397"
/translation="CEEAQASQLLNLEGRTGTAEKKLADCEKTAVEFGNHMESKWAVL
GTLLQEYGLLQRRLENLENLLRNRNFWVLRLPPGSKGEAPKVPVTFVDIAVYFSEDEW
KNLDEWQKELYNNLVKENYKTLMSLDAEGSVPKPDAPVQAEPYSCPECGKSFGVRKSL
IIHHRSHTKERPYECAECEKSFNCHSGLIRHQMTHRGERPYKCSECEKTYSRKEHLQN
HQRLHTGERPFQCALCGKSFIRKQNLLKHQRIHTGERPYTCGECGKSFRYKESLKDHL
RVHSGGPGPGAPRQLPPPPERD"
BASE COUNT 489 a 766 c 734 g 450 t
ORIGIN
1 gctgcgagga agcccaggcc agccagctgc tgaacctgga ggggcgcacg gggacagccg
61 agaagaagct ggccgactgt gaaaagacgg ccgtggaatt tgggaaccac atggagagca
121 agtgggccgt gctggggacc ctgctgcagg agtacgggct gctgcagagg cggctggaga
181 acttggagaa cttgctgcgc aacaggaact tctgggtcct gcggctgccc ccgggcagca
241 agggggaggc ccccaaggtt ccagtgactt ttgtcgacat tgctgtgtac ttctccgaag
301 acgagtggaa gaacttggac gaatggcaga aggagcttta taacaacctt gttaaggaga
361 actacaaaac cctcatgtcc ctggacgcgg agggctcagt ccccaagcca gatgctccag
421 tccaggctga gccctactcg tgccccgagt gcggcaagag cttcggcgtg cgcaagagcc
481 tcatcatcca ccaccgcagc cacaccaagg agcggcccta cgagtgcgct gagtgcgaga
541 agagcttcaa ctgccactcg ggcctcatcc gccaccagat gacgcaccgc ggcgagcggc
601 cctacaagtg ctcggagtgc gagaagacct acagccgtaa ggagcacctg cagaaccacc
661 agcggctgca cacgggcgag cggcctttcc aatgtgcact gtgcggcaag agcttcatcc
721 gcaagcagaa cctgctcaag caccagcgca tccacacggg cgagcgcccc tacacgtgcg
781 gcgagtgcgg caagagcttc cgctacaagg agtcgctcaa ggaccacctg cgcgtgcaca
841 gcggcggccc gggccccggc gccccacggc agctcccgcc gcctcctgag cgagactagg
901 gctgggctgg gggagggcag ggccggacgg agtggatcgg gggcggcctg agcaccaacc
961 accttgccgg gtgtcctcag ccaccgtctg gaaatcggca acaggcattg cactccggtt
1021 gggggtcccc cagggtgggg cagggatccc ccagatctgt ctggtctgaa tggacgccca
1081 gctcatctag ggtggaccca gctgctgggg aagagccagg gggaccgcga ggagccgagc
1141 gtcctcgggc accgccctca cacctcctcg agtgccctgg gaccactggg ccacagatgg
1201 tcatcagggg aagccaccag ggagtcccga agcccttctg agatcaggaa atcaggtccc
1261 aaggttagga gacgccctga aaaaaagcga aggccgaggg atgtgctaag ggtaacacct
1321 tcatgatgac aacactgcct cgcgtttcaa tagcgcttta tactttttta agtgttttct
1381 atccgttatc catttcaccc ttggcctatc cctctcagat aggtggggta ggattttcct
1441 ggtgaccgag taaagtgaga ggcaggtgag acggttcacc caatcacacg ggaaggggcg
1501 cgcgctgccc aaccgcgctc tccgcctacc tccgctgctc gggaagctgc tggcctggcc
1561 ctcctggtct ctcttccttt cctggtctct cttcctttcc ttgctctcac ccacggataa
1621 aaccagaagc gacaggaggc cagctcctgg ggttcctggg agccgggaac agattggcta
1681 cggaacgccc caggttgtac attcagaggg ctctttctcc atgggagctc ctggtgccgc
1741 ctcggcccca gcctgtcccc agcccctcaa tctggtgcag cagcatcttg tcactgcaca
1801 acagtggcct ggtcccccac aggcagttag ggccccaggt cagacctcac catgatgatt
1861 tgttccagtt ctcccagggc agaggggcga gggagaggct tttgctgtga gagtagccgt
1921 cacgtgtctc ttcccagcag cgccgggcaa gtgggtgcta gagtctgagc ctcaggctct
1981 cctgccctgg gcctcccaat tggtgctatc tgttactgcc cgtgctcacg gacatggata
2041 cagaccctgc tgtgctccac accctgcagg cgcctcggga agcgcccaaa ggattcccct
2101 tcacgttggt gcacctgctc catagctccg ggcgctgcgt cccgaggggc cacagtctcc
2161 atttcagcgt cttgcatggc ctggcaccgg gtggggtggt atgccccagg acccttgttt
2221 gtgtcaaaaa tgactttccc tgcccttgcc gtgggtccgg cgttcctccc agccgggatc
2281 acagtgggca gccggcaccc ggcaccactt tggcgagcgt cctgcttccg ccctcgccct
2341 catctacgct gctccgcttt cctcagaccc ctttttgccg tgcaaaggga attcttgaca
2401 ttaaataaaa ggtatccaga ttgcaaaaaa aaaaaaaaa
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