LOCUS BC031682 1629 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens RNA binding motif protein 42, mRNA (cDNA clone
MGC:35002 IMAGE:5163682), complete cds.
ACCESSION BC031682
VERSION BC031682.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1629)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1629)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: i Column: 16.
FEATURES Location/Qualifiers
source 1..1629
/db_xref="H-InvDB:HIT000041364"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35002 IMAGE:5163682"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1629
/gene="RBM42"
/db_xref="GeneID:79171"
/db_xref="HGNC:HGNC:28117"
CDS 106..1458
/gene="RBM42"
/codon_start=1
/product="RBM42 protein"
/protein_id="AAH31682.1"
/db_xref="GeneID:79171"
/db_xref="HGNC:HGNC:28117"
/translation="MAGAGPAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALF
EQEVLGAPVPGIPTAVPAVPTVPTVPTVEAMQVPAAPVIRPIIATNTYQQVQQTLEAR
AAAAATVVPPMVGGPPFVGPVGFGPGDRSHLDSPEAREAMFLRRAAGPRPMALRPPHQ
ALVGPPLPGPPGPPMMLPPMARAPGPPLGSMAALRPPLEEPAAPRELGLGLGLGLKEK
EEAVVAAAAGLEEASAAVAVGAGGAPAGPAVIGPSLPLALAMPLPEPEPLPLPLEVVR
GLLPPLRIPELLSLRPRPRPPRPEPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTAA
GSSWEDPSLLEWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTK
GYGFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEKKKLGLR
"
BASE COUNT 334 a 520 c 515 g 260 t
ORIGIN
1 gtcatcctcg ggagcccacc cggacgaagg gggagagtag acagcagaac cagcggcggc
61 ggctaagcag agactgtagt agcggcgaca gcgacgacgg cagcgatggc tggggcgggg
121 ccagccccgg gactcccggg tgcaggagga cccgtggtcc cgggtcctgg cgctggcatc
181 ccgggcaaaa gcggcgagga acgcttgaag gaaatggagg cggagatggc cctgtttgag
241 caggaagttc tgggggctcc agtacctgga atcccaactg ctgtgcctgc ggtgcccact
301 gtccccacgg tccccacagt agaagcgatg caggtcccag cggctcctgt gatccgccca
361 attatcgcga ccaacacata ccagcaggtc cagcagactc tggaggcccg agcagctgct
421 gcagccacag tagttcctcc catggtgggt ggccctcctt ttgtaggccc tgttggcttt
481 ggccctggtg atcggagtca cctggacagc ccagaggctc gagaagccat gttcctgcgg
541 cgggcagccg gcccccgccc tatggcccta cggccccctc accaggccct cgtgggcccc
601 cctctgcctg ggccccctgg accacccatg atgctgccac caatggctcg ggctccaggg
661 cccccgctgg gctccatggc tgcactgagg ccccctctgg aagagccagc agcaccccga
721 gagctgggcc taggcctggg gttgggcctg aaagagaagg aagaggcagt ggtggcggcg
781 gcggctgggc tggaggaggc tagcgcggct gtggccgtgg gggcaggagg tgccccagct
841 ggccctgcag tcattgggcc cagcctgccg ctggccctgg ccatgccatt gcccgagcct
901 gagcccctgc ccctcccgtt ggaggtcgtc cgcggcctcc tgcccccgct gcgcattcct
961 gaactcctgt ccctgcgtcc tcggccccgg ccccctcggc cagagccacc cccaggcctc
1021 atggctcttg aggtcccaga gcccctgggt gaagacaaga agaaggggaa gccagagaaa
1081 ttgaaacggt gcattcgcac agcggcaggg agcagctggg aggaccccag cctgctggag
1141 tgggatgcag atgacttccg gatcttctgt ggggatctgg gcaatgaggt gaacgatgac
1201 atcttggcac gcgccttcag ccgcttccca tccttcctta aggccaaggt gatccgtgac
1261 aagcgcacag gcaagaccaa gggctacggc ttcgtcagct tcaaggaccc cagcgactac
1321 gtgcgcgcca tgcgtgagat gaatgggaag tatgtgggct cgcgccccat caagcttcgc
1381 aagagcatgt ggaaggaccg gaatctggac gtggtccgca agaagcagaa ggaaaagaag
1441 aagctgggcc tgagataggg tctgtggcca ggcacccgct cccacctggc cgggcgctgg
1501 ctcctccctc agttctcttt ggaaaacccc cagctgtcca cccatcccct gccccaaaac
1561 cagtttcaat aaatttacgt tcatttcccc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaa
//