LOCUS BC031663 1976 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens guanylate cyclase activator 1A (retina), mRNA (cDNA
clone MGC:34591 IMAGE:5172128), complete cds.
ACCESSION BC031663
VERSION BC031663.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1976)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1976)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254414.
FEATURES Location/Qualifiers
source 1..1976
/db_xref="H-InvDB:HIT000051039"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34591 IMAGE:5172128"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1976
/gene="GUCA1A"
/gene_synonym="COD3"
/gene_synonym="GCAP"
/gene_synonym="GCAP1"
/db_xref="GeneID:2978"
/db_xref="HGNC:HGNC:4678"
/db_xref="MIM:600364"
CDS 616..1221
/gene="GUCA1A"
/gene_synonym="COD3"
/gene_synonym="GCAP"
/gene_synonym="GCAP1"
/codon_start=1
/product="guanylate cyclase activator 1A (retina)"
/protein_id="AAH31663.1"
/db_xref="GeneID:2978"
/db_xref="HGNC:HGNC:4678"
/db_xref="MIM:600364"
/translation="MGNVMEGKSVEELSSTECHQWYKKFMTECPSGQLTLYEFRQFFG
LKNLSPSASQYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVEQKLRWYFKLYDVD
GNGCIDRDELLTIIQAIRAINPCSDTTMTAEEFTDTVFSKIDVNGDGELSLEEFIEGV
QKDQMLLDTLTRSLDLTRIVRRLQNGEQDEEGADEAAEAAG"
BASE COUNT 526 a 519 c 524 g 407 t
ORIGIN
1 cagaagttcc acctcaccat caagaaaggc cctggtccag gatgtgcaag gtgtgatgaa
61 atcacagggc tggggaaggt cagctcgggg tcacaagaag cctgatgggc aggaaagagc
121 atgaaagccc cagccagcct cacctgtgcg gctgggagga ctcacagaaa ccctctgtac
181 ccagtcatgg gccaaagaca ccgtcatgca agggggtgaa ggctccacac tcgtcccggc
241 cccgggcgtg gaagcaggac ctcgagcagt ctctggcagc agcctatgtg ccggtcgttg
301 tggactctaa ggggcagaat ccggacaagc tcagggtaca gtctcccctg gggctgcaag
361 gatttagtgg agactcttaa caccagttct ctggcatctg tgagtttgag tgtgggccat
421 catcttcttc cttctgctct ctccctctcc acatttcccg gtaccatctg atccatcagg
481 cccttctttg ctcaggcctg aaggactcag gcctgtgaga gaggacggcc ccgttgtcgg
541 ccaagacacc tttgggcgag gagcagcgaa cagggcctgt ccatctcaga cgtcagcccc
601 ctgaaggcct gagcaatggg caacgtgatg gagggaaagt cagtggagga gctgagcagc
661 accgagtgcc accagtggta caagaagttc atgactgagt gcccctctgg ccaactcacc
721 ctctatgagt tccgccagtt cttcggcctc aagaacctga gcccgtcggc cagccagtac
781 gtggaacaga tgtttgagac ttttgacttc aacaaggacg gctacattga tttcatggag
841 tacgtggcag cgctcagctt ggtcctcaag gggaaggtgg aacagaagct ccgctggtac
901 ttcaagctct atgatgtaga tggcaacggc tgcattgacc gcgatgagct gctcaccatc
961 atccaggcca ttcgcgccat taacccctgc agcgatacca ccatgactgc agaggagttc
1021 accgatacag tgttctccaa gattgacgtc aacggggatg gggaactctc cctggaagag
1081 tttatagagg gcgtccagaa ggaccagatg ctcctggaca cactgacacg aagcctggac
1141 cttacccgca tcgtgcgcag gctccagaat ggcgagcaag acgaggaggg ggctgacgag
1201 gccgctgagg cagccggctg agtgcaccgc ccggctgctt ctgcactagc gggtggggtg
1261 gtatggtggt gcctgttggt ggtgttcttg tcttaaccct agatagaatc taatgaactc
1321 agaggcttag ctcgcctctt tagggtccat ggtggcagca gagaggcaga agtgggagtc
1381 cagagccagg aacagtgaag gatggttcct ggcccctctg agtgacagct ggtggcagca
1441 ctccttgctg gggggcactg ttcaacatcc ctctgccgtc gggtgacccc ctagcccttc
1501 tgactcctct cccagctttt cccagctttc cccactgagc ttctccagtc catgctcttc
1561 tggacgtgga ctctctgagg cagaactgag cttttccagg cctcttatgg aatcctgcag
1621 atccagtggc tgcagcttca atcccagtgc tgcaatcaca catccattct gccctggggg
1681 accctggagc ctacttgtgc gctttgcatt tcattgattg acgcctccct tcaacaagca
1741 tttactgagc gcctactatg tactaatgct agatgttaga tgtacaaaga agacagtttt
1801 catcctctag gaactcatag gctaatggtg agacacacag acaaacatca ttataataaa
1861 atatgctaag agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//