LOCUS BC031616 1920 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear RNA export factor 3, mRNA (cDNA clone
MGC:34209 IMAGE:5170537), complete cds.
ACCESSION BC031616
VERSION BC031616.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1920)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1920)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11545756.
FEATURES Location/Qualifiers
source 1..1920
/db_xref="H-InvDB:HIT000041336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34209 IMAGE:5170537"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1920
/gene="NXF3"
/db_xref="GeneID:56000"
/db_xref="HGNC:HGNC:8073"
/db_xref="MIM:300316"
CDS 65..1660
/gene="NXF3"
/codon_start=1
/product="nuclear RNA export factor 3"
/protein_id="AAH31616.1"
/db_xref="GeneID:56000"
/db_xref="HGNC:HGNC:8073"
/db_xref="MIM:300316"
/translation="MSLPSGHTTGHTDQVVQRRARCWDIYQRRFSSRSEPVNPGMHSS
SHQQQDGDAAMHGAHMDSPVRYTPYTISPYNRKGSFRKQDQTHVNMEREQKPPERRME
GNMPDGTLGSWFKITVPFGIKYNEKWLLNLIQNECSVPFVPVEFHYENMHASFFVENA
SIAYALKNVSGKIWDEDNEKISIFVNPAGIPHFVHRELKSEKVEQIKLAMNQQCDVSQ
EALDIQRLPFYPDMVNRDTKMASNPRKCMAASLDVHEENIPTVMSAGEMDKWKGIEPG
EKCADRSPVCTTFSDTSSNINSILELFPKLLCLDGQQSPRATLCGTEAHKRLPTCKGS
FFGSEMLKNLVLQFLQQYYLIYDSGDRQGLLSAYHDEACFSLSIPFNPEDSAPSSFCK
FFKDSRNIKILKDPYLRGELLKHTKLDIVDSLSALPKTQHDLSSFLVDMWYQTEWMLC
FSVNGVFKEVEGQSQGSVLAFTRTFIATPGSSSSLCIVNDKLFVRDTSHQGTQSALFT
LVPTAFSSSVPAFSQEQQKMLPS"
BASE COUNT 537 a 480 c 452 g 451 t
ORIGIN
1 ccaaactccc gtccccaggc cacacagatt ctcctcaaga gagccctata aggacattgg
61 taaaatgtca ctgccttcag gacacactac gggtcacact gatcaagttg ttcaaagaag
121 agcaagatgt tgggatattt accaaaggag atttagcagt aggtctgaac ctgtcaatcc
181 tggcatgcat tcttcatccc atcagcagca agatggagat gcagcaatgc atggtgccca
241 catggactct ccagtaagat acactcccta tactatttca ccctataatc ggaaaggcag
301 ttttcgtaaa caagaccaaa cccacgttaa catggagaga gagcaaaaac ctccagagag
361 aagaatggag gggaacatgc cggatgggac cttagggagc tggttcaaga tcacagttcc
421 ctttggcata aaatacaatg agaagtggct gctgaatttg attcagaatg aatgcagtgt
481 acccttcgtc ccagttgagt ttcactatga aaacatgcat gccagcttct ttgtggagaa
541 tgccagcatc gcctatgcac tgaagaatgt cagtggcaag atttgggatg aggataatga
601 aaagatatca atctttgtca accctgctgg cataccccac tttgtgcaca gggagctgaa
661 gtcagaaaag gtggagcaga taaagctggc catgaaccaa cagtgtgatg tctcccagga
721 agctcttgat atccagagac tcccatttta cccagacatg gtgaaccgtg atactaagat
781 ggcatcgaat cctagaaagt gcatggctgc ctccctggac gtccatgaag agaacatacc
841 tacagtgatg tctgcagggg agatggacaa gtggaaaggg atagagccag gagagaagtg
901 tgcggacaga agcccagtgt gcacgacctt ctcggatacc tccagcaaca taaactccat
961 cctggaattg ttccccaaat tattatgcct ggatggccag cagtcaccca gagcaacttt
1021 atgtggtact gaagcccaca agaggttacc aacctgtaag ggaagcttct ttggatctga
1081 gatgttgaag aatctggtcc tgcaattcct gcagcagtat tacttgatct atgactctgg
1141 agatcgacag ggtctcctta gtgcttacca cgatgaggcc tgcttctccc tgagcattcc
1201 cttcaatcct gaggactcag ccccgagcag cttctgcaag ttcttcaagg atagcaggaa
1261 tataaaaatt ctcaaggacc cctaccttcg gggggagctg ctgaagcaca caaaacttga
1321 tattgtggac tccctcagtg cgttgcctaa aactcagcat gacctcagct ccttcctggt
1381 ggacatgtgg taccagacgg aatggatgct ctgcttttct gtcaacgggg tgttcaagga
1441 agtggaagga cagtctcagg gttctgttct cgccttcacc cggaccttca ttgctacccc
1501 tggcagcagt tccagtctgt gcatcgtgaa tgacaagctc tttgtgcggg ataccagcca
1561 ccaagggacc cagagtgcct tgttcaccct agtgcccaca gccttctcca gctccgtgcc
1621 tgccttctcc caggagcagc agaaaatgct gccttcgtaa caaccagtgt gactacgtca
1681 gagctcctca tgttcttgca tggcccaaga tgtatttccc tgtgactgaa ccaggagatc
1741 tggctggggc taagaagccg aagcccaact cacagggctg actctcatcc ttccaaaggg
1801 gccagttgtt ctgtgcactt gtccacccct gttaccccca ggatctctgt tccttttcac
1861 aataaagtat ggtgtcttgt tatgtcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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