LOCUS BC031614 1716 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens FERM and PDZ domain containing 2, mRNA (cDNA clone IMAGE:5176033), complete cds. ACCESSION BC031614 VERSION BC031614.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1716) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1716) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: m Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 63252915 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1716 /db_xref="H-InvDB:HIT000041335" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5176033" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1716 /gene="FRMPD2" /gene_synonym="MGC35285" /gene_synonym="PDZK5C" /db_xref="GeneID:143162" /db_xref="HGNC:HGNC:28572" CDS 339..1124 /gene="FRMPD2" /gene_synonym="MGC35285" /gene_synonym="PDZK5C" /codon_start=1 /product="FERM and PDZ domain containing 2" /protein_id="AAH31614.1" /db_xref="GeneID:143162" /db_xref="HGNC:HGNC:28572" /translation="MGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGFS FVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQEVLH LLRGAPQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDSCTSPILDQEDS WRDSASPDAGEGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPHLCKLHQER DESTLATSLEKDVRQNCYSVCDIMRLGRYSFSSPLTRLSTDIF" BASE COUNT 472 a 408 c 420 g 416 t ORIGIN 1 tgttaagctt atgaacacct aatcttattg ctcagtggag aatacaatct aaacgaacag 61 gtgaatacag aagacagtgc cagtcggagg gtggcattaa caccagtgtg ccatatggtg 121 gtatctatgt gaaatccatt gttcctggag gaccagctgc caaggaaggg cagatcctac 181 agggtgaccg actcctgcag gtggatggag tgattctgtg cggcctcacc cacaagcagg 241 ctgtgcagtg cctgaagggt cctgggcagg ttgcaagact ggtcttagag agaagagtcc 301 ccaggagtac acagcagtgt ccttctgcta atgacagcat gggagatgaa cgcacggctg 361 tttccttggt aacagccttg cctggcaggc cttcgagctg tgtctcagtg acagatggtc 421 ctaagtttga agtcaaacta aaaaagaatg ccaatggttt gggattcagt ttcgtgcaga 481 tggagaaaga gagctgcagc catctcaaaa gtgatcttgt gaggattaag aggctctttc 541 cggggcagcc agctgaggag aatggggcca ttgcagctgg tgacattatc ctggccgtga 601 atggaaggtc cacggaaggc ctcatcttcc aggaggtgct gcatttactg agaggggccc 661 cacaggaagt cacgctcctc ctttgccgac cccctccagg tgcgctgcct gagctggagc 721 aggaatggca gacacctgaa ctctcagctg acaaagaatt caccagggca acatgtactg 781 actcatgtac cagccccatc ctggatcaag aggacagctg gagggacagt gcctccccag 841 atgcagggga aggcctgggt ctcaggccag agtcttccca aaaggccatc agagaggcac 901 aatggggcca aaacagagag agaccttggg ccagttcctt gacacattct cctgagtccc 961 accctcattt atgcaaactt caccaagaaa gggatgaatc aacattggcg acctctttgg 1021 aaaaggatgt gaggcaaaac tgctattcag tttgtgatat catgagactt ggaagatatt 1081 ccttctcatc tcctctaacc agactttcga cagatatttt ctgagcacct tctctgcatg 1141 tctgcagtgc tgtgtaaaat gccctacctt tgcatggact attctttcta atcaagaggc 1201 gtgtgtggcg aacttggggc agcccctgga agtcttgttc tttgaccatt acgtctgcgg 1261 ctgcatcacc agataatgag cttcaccact cgtctgcctc ctgtgtcctt ccgcggggag 1321 taaatgtcac ttcagcttgc cgcatctcta aataggcaaa ttttcagtgc tcagaaaagg 1381 acctgatctt tgcacaaagt gctttgatgg ttgcctgctt gagtcactcc caatcccttc 1441 ctgaagccct ttctttataa ttcttctgtt gaaatagcca tcatattcac agtactaatc 1501 acagcatctc acatttacta aaaacttacc ccataccagg aacccagagt tgggggggct 1561 gtgtcagaat tatgtaattt acgtgtccca ataatcctag acgcttcttg accatctagt 1621 tttgtcaaat gagaaaactg aggttccaaa gaagtcaata aacttgtcca aagtctgaaa 1681 aaaaaaaaag aaaaaaaaaa aaaaaaaaaa aaaaaa //