LOCUS BC031604 2011 bp mRNA linear HUM 12-JAN-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 71, mRNA (cDNA clone
IMAGE:5178217), partial cds.
ACCESSION BC031604
VERSION BC031604.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2011)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2011)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: o Column: 15.
FEATURES Location/Qualifiers
source 1..2011
/db_xref="H-InvDB:HIT000092409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5178217"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2011
/gene="C17orf71"
/gene_synonym="FLJ10587"
/db_xref="GeneID:55181"
/db_xref="HGNC:HGNC:25551"
/db_xref="IMGT/GENE-DB:25551"
/db_xref="MIM:25551"
CDS <1..1755
/gene="C17orf71"
/gene_synonym="FLJ10587"
/codon_start=1
/product="C17orf71 protein"
/protein_id="AAH31604.1"
/db_xref="GeneID:55181"
/db_xref="HGNC:HGNC:25551"
/db_xref="IMGT/GENE-DB:25551"
/db_xref="MIM:25551"
/translation="VSLRDLLMGASAWMGSESPGGSPTEGGGSAAGGPEPPWREDEIC
VVGIFGKTALRLNSEKFSLVNTVCDRQVFPLFRHQDPGDPGPGIRTEAGAVGEAGGAE
DPGAAAGGSVRGSGAVAEGNRTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQLLR
ACRALQSGEAGGGLSLPHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDIT
YDRVFRALDGLRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPP
RNQDPAHPDKPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYI
VPGSQEEDPVGMLLDQLRSHCTVKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFHIDS
SSSSSSGQLVDFTLREFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASK
LYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQ
SNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERS
LTDQHCVHKFHSLPKSGS"
BASE COUNT 533 a 478 c 490 g 510 t
ORIGIN
1 gtgagcttgc gagaccttct aatgggagcg tcagcctgga tgggctctga aagtcccgga
61 gggtccccta ctgagggcgg agggagcgcg gctggcggac cggagcctcc atggcgggag
121 gatgagatct gcgttgtggg aatcttcggc aagacggctc tacgcctgaa ttccgagaag
181 ttctctcttg tgaatacggt gtgcgaccga caggtctttc ctctctttcg ccaccaagat
241 cctggggatc caggacctgg aatcagaact gaggctggcg ccgtgggtga ggccggtgga
301 gccgaggacc ctggggctgc agccgggggt tcagttcggg gaagtggagc tgtcgcggaa
361 ggtaaccgaa ctgaggcagg ctcccaggac tacagccttc tgcaggccta ctacagtcag
421 gaaagcaaag ttctgtatct tctcctcacc tccatctgtg acaattcaca gcttctccgg
481 gcttgtcggg ctcttcagag cggggaagct ggaggtggac tctctttacc tcatgcagaa
541 gcacacgagt tctggaagca tcaagagaag ctgcagtgcc tcagtctcct ttacctattc
601 tctgtctgtc atatcttgct tctggtccat cccacttgtt cctttgatat cacttatgat
661 cgagtattca gagccctgga tgggctgaga cagaaggtcc tgccgctcct taaaacagcc
721 attaaggatt gtccagttgg caaagactgg aagctaaact gccgaccttg cccacctaga
781 ctccttttcc tctttcaact caatggagcc ctcaaggtag aacctcctcg gaaccaagac
841 ccagctcatc cagacaagcc caagaaacat tctcccaaaa ggaggctgca gcatgccctg
901 gaggaccaga tctatagaat cttccggaag agtcgtgtct tgactaatca gagcatcaac
961 tgcctcttta ctgtgcctgc caaccaagct ttcgtgtaca tagtaccggg aagccaggag
1021 gaggacccag taggtatgtt gctggaccaa cttaggagtc attgtactgt gaaggacccg
1081 gaatctttgc tggtgcctgc acccctttct gggcctaggc gataccaggt gatgaggcag
1141 cacagccgac aacaactttc ctttcacatt gacagcagca gttccagttc ttcaggccag
1201 ctagtggatt tcactcttcg ggaattccta tggcagcatg tggagctagt tctaagcaag
1261 aaaggtttcg atgacagtgt gggcaggaac ccacagcctt cccattttga acttcctact
1321 tatcagaagt ggatctcagc agcttcaaaa ctgtatgagg tggctattga tgggaaagaa
1381 gaggacttgg ggtcacccac tggagagcta acatctaaga ttttaagcag tattaaagtc
1441 ttggaaggat ttttggatat tgacacaaaa ttctcagaaa accgatgcca aaaagcttta
1501 cccatggccc acagtgccta ccagtcaaat ttgcctcata attacacaat gactgtccat
1561 aagaatcagc ttgcccaggc tcttcgagtg tacagtcaac atgctagagg tccagcattt
1621 cacaaatacg ccatgcagtt acatgaggac tgctacaaat tttggagcaa tggccatcag
1681 ctctgtgagg agaggagttt aactgatcaa cactgtgtgc acaaatttca ctcattacct
1741 aaatcaggta gctaaaattt gttcagcatt ttgaaataaa aactttgagc tgtgttttca
1801 ttcttgtttt aagatagtct gttcactatg tattgatatt ttagaaagag ccctacagaa
1861 atttaggtgc atcagctata cgttttctct cctgctgtaa aaggaaaata tcagctatga
1921 ctactttctt attttttttc atttaaagga tacgtcctag tgaattggta agtgagaatt
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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