LOCUS BC031603 1861 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 12, mRNA (cDNA clone MGC:35126 IMAGE:5168160),
complete cds.
ACCESSION BC031603
VERSION BC031603.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1861)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1861)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21040244.
FEATURES Location/Qualifiers
source 1..1861
/db_xref="H-InvDB:HIT000041329"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35126 IMAGE:5168160"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1861
/gene="ALS2CR12"
/db_xref="GeneID:130540"
CDS 445..1713
/gene="ALS2CR12"
/codon_start=1
/product="ALS2CR12 protein"
/protein_id="AAH31603.1"
/db_xref="GeneID:130540"
/translation="MYPNPLIYCTCWDPWNLGPRKLIKTPQLPRKNSTGSSKLTPLLP
APKNHNYLQPTKPVVSPKMKIHSARQEETNKSFYEVINVSPGYQLVRNREQISVTLGD
EMFDRKKRWESEIPDKGRFSRTNIISDLEEQISELTAIIEQMNRDHQSAQKLLSSEMD
LRCAEMKQNFENKNRELKEAHEAELSELENNYKAALKAEKLAAQEKLEEMGKEYKYLK
NMFRTYQDSIYDEMEEKWSKQKAKWKKDEKFERENILLQQKKKMTKKFEMESGEEDKK
INESCSAVFENFIQEKEELLKQHQSDTLQLEELRKTKEVMQEELHAQALILESLNTNL
YYTQLELQKEKAIVGNLEKMLQTKFAETEEKYKHTIQILTEENIHLKQKIISKNEEIC
EGCSGRLASITVSKDDSDTVQDGSKKGQES"
BASE COUNT 658 a 374 c 403 g 426 t
ORIGIN
1 ctttggcctg ccatctccca agggcaaacc tcacaactca ggcccaagtc acaggaatct
61 gaatggtggg gtgaccttct cctctagttt aatttcattg caatactgag aaacttcaac
121 tgttttgtct ttagaaggga aattcatgtt tgtgccaggc cagcctttgt aaaagccttt
181 gattggattc actagaagtc tgtcttcccg cagtacatat actgtgaatt ttctccttcg
241 gcatttcaac cacttggaat ggccactaaa gtggcttttg atctaaagta aactctgatt
301 ctgtgttgat ggggaaccat ttctctctaa catggtggtt tctttaagat gtttgacttg
361 ggccacatga gaataacaga tctttgggca gtccaagcaa gagcctcctg atctagcagc
421 caagactccc cctgaccttt ggccatgtac cccaaccctc tcatctactg cacctgctgg
481 gacccctgga acttgggacc acggaagcta atcaagaccc ctcaactacc acgcaagaac
541 tccacaggga gttccaagct aactcctctt ctaccagctc caaaaaatca caattacctc
601 caaccaacaa aacctgttgt ttccccaaaa atgaaaatcc attcagcaag gcaagaagag
661 actaataaat cattttatga agtgatcaac gtgtcacctg gctatcaact tgttcggaat
721 cgggaacaga tttctgtcac cttaggggat gagatgtttg ataggaaaaa gcggtgggaa
781 tcggagatcc cggacaaagg cagattttcc aggaccaaca tcatttctga cctagaagag
841 caaatctcag agctgacagc aataattgaa caaatgaaca gagaccacca gtctgcccag
901 aaattgctct ccagtgaaat ggatctccgc tgtgctgaga tgaaacagaa ctttgaaaac
961 aagaacaggg agctcaaaga ggcccatgaa gcagaactca gtgagttgga gaacaactac
1021 aaagcagcct tgaaggcaga gaagttggct gcccaagaga agctagagga gatgggaaaa
1081 gaatacaagt atttgaagaa tatgtttcgt acgtatcagg acagtattta tgatgaaatg
1141 gaagagaagt ggtcaaaaca gaaggcgaaa tggaagaagg atgagaagtt cgagcgagaa
1201 aatatcctgc tacagcaaaa aaaaaagatg accaaaaaat tcgaaatgga gtcaggagaa
1261 gaagataaga aaataaatga atcctgcagt gctgtctttg agaacttcat tcaagagaag
1321 gaggagctct tgaaacaaca tcaaagtgac accttgcaat tagaagagct gagaaaaacc
1381 aaagaggtca tgcaggaaga attgcatgca caagccctta tcctagagtc actgaacaca
1441 aacctctact atacccagtt ggaactccag aaagagaaag ctatagtggg aaatctggag
1501 aaaatgcttc aaaccaagtt tgctgaaact gaagaaaagt ataagcacac catacagatc
1561 ctgacggaag agaacattca tctgaagcaa aagataattt ctaagaatga agaaatttgt
1621 gaaggatgtt ctgggagatt ggcctctatt actgtttcta aggatgattc tgacactgtg
1681 caagatggta gcaagaaagg acaagaatca taaacaaaaa gttgctctgc attgttgaag
1741 atggttggca caccatttct gtaggcccag gaaactcctg ggagggtttt cttgagaaaa
1801 tgcatataat gagtttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 a
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