LOCUS BC031411 1485 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SUMO/sentrin specific peptidase family member 8, mRNA
(cDNA clone MGC:35478 IMAGE:5195120), complete cds.
ACCESSION BC031411
VERSION BC031411.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1485)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1485)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33942065.
FEATURES Location/Qualifiers
source 1..1485
/db_xref="H-InvDB:HIT000041295"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35478 IMAGE:5195120"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1485
/gene="SENP8"
/gene_synonym="DEN1"
/gene_synonym="HsT17512"
/gene_synonym="NEDP1"
/db_xref="GeneID:123228"
/db_xref="HGNC:HGNC:22992"
/db_xref="MIM:608659"
CDS 100..738
/gene="SENP8"
/gene_synonym="DEN1"
/gene_synonym="HsT17512"
/gene_synonym="NEDP1"
/codon_start=1
/product="SUMO/sentrin specific peptidase family member 8"
/protein_id="AAH31411.1"
/db_xref="GeneID:123228"
/db_xref="HGNC:HGNC:22992"
/db_xref="MIM:608659"
/translation="MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQF
HDCSDHVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTH
WSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNS
YDCGMYVICNTEALCQNFFRQQTESLLQLLTPAYITKKRGEWKDLIATLAKK"
BASE COUNT 472 a 316 c 296 g 401 t
ORIGIN
1 ggccaacaca gaggtgcctg aaggctggtt ggggtggtga ggcccgaggc agctcttgtt
61 cagcttctgg aatttctgag cagccctcgt cagtacaaga tggaccccgt agtcttgagt
121 tacatggaca gtctactgcg gcaatcagat gtctcactat tggatccgcc aagctggctc
181 aatgaccata ttattgggtt tgcgtttgag tactttgcca acagtcagtt tcatgactgc
241 tctgatcacg tcagtttcat cagccctgaa gtcacccagt tcatcaagtg cactagcaac
301 ccagcagaga ttgccatgtt ccttgaacca ctggacctcc ccaacaagag agttgtattt
361 ttagccatca atgataactc caaccaggca gctggaggaa cccactggag tttattggtc
421 tacctccaag ataaaaatag cttttttcat tatgattccc atagcaggag caactcagtt
481 cacgcaaagc aggtagcaga gaaactggag gctttcttag gcagaaaagg agacaaactg
541 gcctttgtgg aagagaaagc ccctgcccaa caaaacagct atgactgtgg gatgtacgtg
601 atatgtaaca ctgaggcctt gtgtcagaac ttctttaggc aacagacaga atcactgctg
661 cagctactca cccctgcata catcacaaag aagaggggag aatggaaaga tctcattgcc
721 acacttgcta aaaagtagct attgaagtat atttgcgact tttgaaggct cctctttctg
781 cccttcccca tttgttggat ggctgcaatc tcagtgcctg agggaagatg cctagtagag
841 gaaagcttaa tactcttttt cctgaaagaa tatcatcctc tgcattatcc ccatggaacg
901 tttcacttta accctgactg gggagcaata tgttctgtga aaatatcttg aaattgtaca
961 ccaaaacctt acaaccaact tatttgaaca tttattacac acagggttta cgtaagactt
1021 ttcttattgg tatataatta atttcctttg gtctccctta tccacattgg cttattctgg
1081 aggaaaagca gtgatctgta aaacaaatca agaatatatt aaatctagag gaatgcagag
1141 aagaaaacta taaaacagaa ccaaaaactt gttgcacagc ctacataatt aagagatcaa
1201 ctggctggaa gcagatcaag gcctaacttc attcaagacc taaatattat gagactcagt
1261 tattcggttt tatgtgacat ctcttccatt caccatgcac aggcttttcc agctatctat
1321 ataatgtttg caaatatttg ataaagatga tgttacccta tcttcctcca tctgattcct
1381 ggaatgcttg aagaaagggg aaatcttgag taacctcatt aaaattaatg tctggtggaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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