LOCUS BC031329 721 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens transmembrane protein 149, mRNA (cDNA clone
IMAGE:4579357), complete cds.
ACCESSION BC031329
VERSION BC031329.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375912
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..721
/db_xref="H-InvDB:HIT000041280"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4579357"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..721
/gene="TMEM149"
/gene_synonym="FLJ22573"
/db_xref="GeneID:79713"
/db_xref="HGNC:HGNC:23620"
CDS 156..659
/gene="TMEM149"
/gene_synonym="FLJ22573"
/codon_start=1
/product="TMEM149 protein"
/protein_id="AAH31329.1"
/db_xref="GeneID:79713"
/db_xref="HGNC:HGNC:23620"
/translation="MGPGRCLLTALLLLALAPPPEASQYCGRLEYWNPDNKCCSSCLQ
RFGPPPCPELSSLASQPLSRLLDELEVLEELIVLLDPEPGPGGGMAHGTTRHLAARYG
LPAAWSTFAYSLRPSRSPLRALIEMVVAREPSASLGQLGTHLAQLGRADALRVLSKLG
SSGVCWA"
BASE COUNT 146 a 216 c 212 g 147 t
ORIGIN
1 gttgggggat gagggctcgg gggtagattc ccggcttccg aagaggcgtg agaattctgt
61 tcccccacat caccgcgtcc tttcttctgc ccgatttccc cggaaagtgt agcagaggcg
121 ctgtgtttgg aagtcccgct atcacggccc cccagatggg gcctggacga tgcctcctga
181 cggccttgtt gcttctggcc ctggcgccac cgccggaagc ctcccagtac tgcggccgcc
241 ttgaatactg gaacccagac aacaagtgct gcagcagctg cctgcaacgc ttcgggccgc
301 ccccctgccc ggaactgtcc agtctggcgt cacaacccct gtctcgcctc ctggatgagc
361 tggaggtgct ggaagagctg attgtactgc tggaccctga gcctgggcca ggtgggggta
421 tggcccatgg cactactcga cacctggccg caagatatgg gctgcctgct gcctggtcca
481 cctttgccta ttcgctgagg ccgagtcgct cgccgctgcg ggctctgatt gagatggtgg
541 tggcaaggga gccctctgcc tccctgggcc agcttggcac acacctcgcc cagctagggc
601 gggcagatgc attgcgggtg ctgtccaagc ttggctcatc tggggtttgc tgggcttaac
661 acccaataaa gaactttgct gactaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
721 a
//