LOCUS BC031260 1278 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens sorting nexin 31, mRNA (cDNA clone MGC:39715
IMAGE:5272635), complete cds.
ACCESSION BC031260
VERSION BC031260.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1278)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1278)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..1278
/db_xref="H-InvDB:HIT000041265"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39715 IMAGE:5272635"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1278
/gene="SNX31"
/db_xref="GeneID:169166"
/db_xref="HGNC:HGNC:28605"
CDS 40..1065
/gene="SNX31"
/codon_start=1
/product="SNX31 protein"
/protein_id="AAH31260.1"
/db_xref="GeneID:169166"
/db_xref="HGNC:HGNC:28605"
/translation="MLGNTENWNTFDIATKKAYLDIFLPNEQSIRIEIITSDTAERVL
EVVSHKIGLCRELLGYFGLFLIRFGKEGKLSVVKKLADFELPYVSLGSSEVENCKVGL
RKWYMAPSLDSVLMDCRVAVDLLYMQAIQDIEKGWAKPTQAQRQKLEAFQKEDSQTKF
LELAREVRHYGYLQLDPCTCDYPESGSGAVLSVGNNEISCCITLPDSQTQDIVFQMSR
VKCWQVTFLGTLLDTDGPQRTLNQNLELRFQYSEDSCWQWFVIYTKQAFLLSSCLKKM
ISEKMVKLAAENTEMQIEVPEQSKSKKYHIQQSQQKDYSSFLSRKSKIKIAKGDCVFG
NIKEEDL"
BASE COUNT 409 a 246 c 304 g 319 t
ORIGIN
1 aattagtgtc agaaaaaatc agggatatgg gctttaggga tgcttggaaa tactgaaaac
61 tggaatacat ttgacatcgc caccaagaaa gcttatctgg acatatttct gcccaatgaa
121 cagagtatta gaatcgaaat tataacatca gacactgctg aaagagtcct agaggtggtg
181 tcacacaaaa ttggactgtg tcgagagctc ttgggctact tcggcctctt tctcattcgg
241 tttggcaagg agggcaagct ctctgttgtg aaaaaattgg ctgactttga actcccttat
301 gttagtcttg gaagttctga ggtggaaaac tgtaaggttg gactccgaaa gtggtatatg
361 gctccatccc tcgactccgt gctgatggac tgcagggtgg cggtagattt gctctacatg
421 caggcaatac aggacattga aaaaggatgg gccaaaccca cacaggcaca gaggcagaaa
481 ttagaagctt tccagaaaga agacagtcaa acaaagtttt tggagctggc ccgggaggta
541 cggcactatg gatacctgca gctggatcct tgtacctgtg actacccaga atcaggctct
601 ggagctgttc tttctgttgg caataatgag atcagctgct gcatcaccct gcctgacagc
661 cagacccagg acatcgtttt ccagatgagc agggtgaagt gctggcaggt cactttcctt
721 ggaactctgc tggatacgga tgggccccag agaactctca accagaactt agagctcaga
781 tttcaataca gtgaggatag ttgctggcag tggtttgtta tttacaccaa acaggctttt
841 ttgctgagta gctgcttgaa aaagatgatc tcagaaaaga tggtaaagct agctgctgag
901 aatacagaaa tgcagattga agttccggaa caaagcaaaa gtaaaaaata ccacattcaa
961 caaagccagc agaaagacta ttctagtttt ctatcaagaa aaagcaagat taagatagct
1021 aaaggtgact gcgtttttgg gaacataaag gaagaagatc tctgaagaaa gctctcatat
1081 tttaaaatat ccttggaggc tatctcaaga cagtgaaaga acttggggat tcaggtgggc
1141 tacctaccat cagtggagga aatttgacct cttcccattt ttttggcatt aacatggact
1201 gtattcatca aggtattata ccacagcact ctatggaaat ctcaagatta gaaaaaaaaa
1261 aagaaaaaaa aaaaaaaa
//