LOCUS BC031237 1288 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens hypothetical protein LOC338579, mRNA (cDNA clone
IMAGE:4838843), complete cds.
ACCESSION BC031237
VERSION BC031237.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1288)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1288)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: c Column: 10
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1288
/db_xref="H-InvDB:HIT000092314"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4838843"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1288
/gene="LOC338579"
/db_xref="GeneID:338579"
CDS 214..585
/gene="LOC338579"
/codon_start=1
/product="hypothetical protein LOC338579"
/protein_id="AAH31237.1"
/db_xref="GeneID:338579"
/translation="MAESLVEKPPDEAAPLVEGTADKIQCLGKATSGKFEQSAEETPK
KIMRTAKETSEKFAWPAKERPRKITWEEKETSVKTECVAGVIPNKTEVLEKGTSEMLT
CPTKETSTKASTNEGSNKDSN"
BASE COUNT 503 a 228 c 281 g 276 t
ORIGIN
1 gaggcacatg ccttgggagc taagtggcag ctatacttca ccactatggc agtaaagatg
61 actataaaga ctggcggggg atggatcctt tcaaatgtac ctgagctggg atgcccagct
121 tgtggaacgc acagcaggag gtgagcagtg gccgaaggaa catctgaagg aacacctgac
181 gaggctgcac ccttggcgga aagaacacct gacatggctg aaagcttggt ggaaaaacca
241 cctgatgagg ctgcaccctt ggtggaggga acagctgaca aaattcaatg tttggggaaa
301 gcaacatctg gaaagtttga acagtcagca gaagaaacac ctaagaaaat tatgaggact
361 gcaaaagaaa catctgagaa atttgcatgg ccagcaaaag aaagacctag gaagatcaca
421 tgggaggaaa aagaaacatc tgtaaagact gaatgcgtgg caggagtaat acctaataaa
481 actgaagttt tggaaaaagg aacatctgag atgctcacgt gtcctacaaa agaaacatct
541 acaaaagcaa gtacaaatga aggaagcaac aaagacagca actgaacaac aagaaaatga
601 tattggaatt attgaatgag cgccataaga tctaacaagt aatgacaatt ttcttttttt
661 ataccaaaat aatagaagtg ataagatgcc cacatcagag tcaggacaaa aagaagatac
721 gaaatcacct tcagtttctg aggtcacagc tatggatgtg gaagagatag gaaaggcctc
781 accacttaag atagaagcag cagctgcata gtggtaacag caatgagtgg atgtcaaaag
841 acagattcaa ctagcctatc aatattcttg ggtgcagttc cttctcatga aagagcaagg
901 gaacttaaaa aatatcactg tgaacaactt acagcaaaaa taaaacaaat gaaaaataag
961 ttttgggtac tacaaaagga actatcagaa gcaaaaataa aattgcagta agtgaatcaa
1021 aaggttaaat gggaacaaga gctctgcagt gtgagcttag aatgaagttg ataatagtga
1081 gaccttgttg gtacaagact atgtaacaca acctgcactt ctcaacaaaa aattgctttt
1141 ctgacttctg cactcaatag caagacaaat ctctcctctg cctcctcatc agactactca
1201 atgtgaaggc aataagaatg aaaaccttta tgtataataa ttcacttcca cttaataaat
1261 agtgaatata taaaaaaaaa aaaaaaaa
//