LOCUS BC031221 1812 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 71, member C, mRNA
(cDNA clone MGC:39520 IMAGE:5272209), complete cds.
ACCESSION BC031221
VERSION BC031221.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23503300.
FEATURES Location/Qualifiers
source 1..1812
/db_xref="H-InvDB:HIT000051022"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39520 IMAGE:5272209"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1812
/gene="FAM71C"
/gene_synonym="MGC39520"
/db_xref="GeneID:196472"
/db_xref="HGNC:HGNC:28594"
CDS 423..1148
/gene="FAM71C"
/gene_synonym="MGC39520"
/codon_start=1
/product="family with sequence similarity 71, member C"
/protein_id="AAH31221.1"
/db_xref="GeneID:196472"
/db_xref="HGNC:HGNC:28594"
/translation="MEDCCMLPYYTAQSSPAMGMFNTSMGKLQRQLYKGEYTIFRYAP
MFESDFIQISKRGEVIDVHNRARMVTMGIVRTSPCLTLPDVMLLARPAAVCDNARCGP
ATQKRESPPAEILELTRLLPLMFVKITIHNSVKKQLHLKLATGRSFYLQLCPPSDASE
DLFVHWENLVYILRPPVEAYSDTRAILAGNTLDSSVLEEVQRSPVGYAMKFCEEKEQF
RISRLHMNAEMFGSTYCDYTIEI"
BASE COUNT 516 a 428 c 466 g 402 t
ORIGIN
1 agtggtggat ggttcaggtt gggaagaaga gcagtgggat tgccagttaa ggttgtggaa
61 tcaaagagca aaggctgttg tgaagtggaa tatcaggctc atatggaggt ccctcccgaa
121 tgagcactga cacctgtgtg cccggacatc cacgagggcc ccaacacctg tgctcctgac
181 agctccatgc actaagcagg gcacagtctg gatccagggg actgactgtc tctggcattg
241 agcggttggt aatcaatacc ccaccatccc tgttctcagt cacttgggga caaaaaagaa
301 agcctgcaga acacgactgc tggcccacct gccagagtag ccaaggaaac aggatgcccg
361 ctaaagcatg ttaaggaagg tgtggagcag ctgctgggaa ctgtcttgat ttaaaggaag
421 acatggagga ctgctgtatg ctaccgtatt acacggccca aagcagcccc gcaatgggca
481 tgtttaacac ctccatgggg aagctgcagc ggcaactgta caaaggcgag tatactatat
541 tcaggtatgc acccatgttt gagagcgact ttatccagat cagcaaaaga ggagaagtga
601 ttgacgtgca caaccgtgcc cgaatggtaa caatgggcat cgttcgcacc agcccctgcc
661 tcacactacc tgatgtcatg ctgctggccc gaccagctgc tgtctgtgac aatgccaggt
721 gtggtcctgc cacccagaaa agagaaagtc cgcctgcaga gatcttagaa ctaaccaggc
781 tgcttccctt gatgtttgtg aaaataacca tccacaacag cgtaaaaaaa cagctccacc
841 tgaagcttgc cacgggccgc tctttttatc ttcagctgtg tcctccatcg gatgcaagtg
901 aagacctttt tgttcactgg gaaaaccttg tttacatcct gagaccacca gtggaggctt
961 acagtgatac cagggctatc ctagctggga acacattgga ctcatctgtg ttggaggaag
1021 tgcagaggag cccagtggga tatgccatga agttttgtga agagaaggag caattcagaa
1081 tcagtagact tcacatgaat gctgaaatgt ttgggtccac ctattgtgat tatacaatag
1141 agatatgaat ccaacatacc tcccacatat actacgttca agagttcaca cacccctgca
1201 gtcataaaac ctatagtgcc tgatgaaggg gcagggtagc aacagcagta gtgatgacag
1261 taagcaccac cacaggtacc atggatgtgg ctgcaaccaa gtctgcagac tcaggagaga
1321 aacacagcac tggcaaaagc agccttcaga ggtccaggag gaagtatagc cagcatggct
1381 attagtgggt gcttccatgt cttaatcttg ttatagcaag ggctgcatgc acattcttgt
1441 cctaaaaggg tacttcaagc atatcagtaa gtgctactgg cctctcccta gagggcagta
1501 tgaatgtggt ggctacagga gcagagagat actgagaagg ctgttgcatt gacagtatct
1561 ctctgctact caaaggctga ctctctgcta ctcagcattg ggagtcagtt atctcagctc
1621 tgcaggatga ggccacatgc gtgaatggga tggaagccag agggtctcta cctagctgga
1681 ttgactctgc agtaataacc tcaaagccca gtactacaca tggtgcagag gtggacatct
1741 cacctaagac tgtggagggg aacaatgtga ttcaccataa taaaatccat caactcaaaa
1801 aaaaaaaaaa aa
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