LOCUS BC031101 2104 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens tubulin, epsilon 1, mRNA (cDNA clone MGC:33949
IMAGE:5298159), complete cds.
ACCESSION BC031101
VERSION BC031101.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2104)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059741.
FEATURES Location/Qualifiers
source 1..2104
/db_xref="H-InvDB:HIT000041249"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33949 IMAGE:5298159"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2104
/gene="TUBE1"
/gene_synonym="dJ142L7.2"
/gene_synonym="FLJ22589"
/gene_synonym="TUBE"
/db_xref="GeneID:51175"
/db_xref="HGNC:HGNC:20775"
/db_xref="MIM:607345"
CDS 68..1495
/gene="TUBE1"
/gene_synonym="dJ142L7.2"
/gene_synonym="FLJ22589"
/gene_synonym="TUBE"
/codon_start=1
/product="tubulin, epsilon 1"
/protein_id="AAH31101.1"
/db_xref="GeneID:51175"
/db_xref="HGNC:HGNC:20775"
/db_xref="MIM:607345"
/translation="MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSF
FRNVDTRVVGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRGVFDTKQLITDI
SGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLL
KVLEDEFPEVYRFVTSIYPSGEDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDII
SKIDLMVNSGKLGTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFE
GSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLL
RADPKHSLYLACALMVRGNVQISDLRRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGH
SHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSAL
IQEYDQLDATKNMPVQDLRRLSIAM"
BASE COUNT 639 a 395 c 425 g 645 t
ORIGIN
1 ggcgttgctg ggggaatgca gaagcggccg cgggctagca agctcccgga gccggcggcg
61 caccaccatg acccagtcgg tggtcgtaca ggtcggccag tgcggaaacc agatcggctg
121 ctgcttctgg gacctggcac taagggagca cgccgcggtc aaccagaaag gaatttatga
181 tgaggcaata agcagcttct ttagaaatgt ggacaccaga gtggttggtg atggtggaag
241 tatttccaag ggaaaaatat gttctttaaa agcacgagca gtcttgattg atatggaaga
301 aggggtagtg aatgaaattc tgcagggacc actgagaggt gtatttgata cgaaacagct
361 catcactgat atttctggct caggaaataa ttgggccgtg ggtcacaaag ttttcggcag
421 tctttaccaa gaccagattt tagagaaatt cagaaagtcg gcagagcact gtgattgctt
481 gcagtgtttc tttataatac attccatggg aggaggaaca ggatctggac ttggcacatt
541 tcttttaaag gtgcttgaag acgaattccc agaagtatac agatttgtga cttccattta
601 tccttctggt gaggatgatg tcataacctc accttataat agcatcttgg caatgaagga
661 acttaatgag catgcagact gtgtattgcc cattgacaat caatctttat ttgacatcat
721 tagcaaaatc gacctcatgg tgaattctgg aaagttgggt acaactgtga agccaaagag
781 tctggttact tcaagttctg gggctttaaa aaagcagcat aagaagccct ttgatgcaat
841 gaataacatt gtggcaaatt tgctcctcaa cctaacgagc tctgcaagat ttgaagggtc
901 ccttaatatg gaccttaatg aaatcagcat gaatttagtt ccttttcctc aacttcatta
961 tctcgtgtca agcctaacac ctctgtatac actgacagat gttaacattc ctcctagaag
1021 attggatcag atgttttcag atgcctttag taaagatcac cagctgcttc gggcagaccc
1081 caaacacagt ctttacctcg cctgtgcact catggttaga ggaaatgtac aaatttcaga
1141 tcttcgtaga aatattgaaa gattaaaacc atctctacaa tttgtctcct ggaatcaaga
1201 aggctggaag accagcctgt gttccgtacc tcctgtgggc cattctcatt cgttattagc
1261 tttagcaaat aacacatgtg tgaagcccac cttcatggaa ctgaaagaga gattcatgag
1321 gctctacaag aaaaaggctc accttcatca ctatctacaa gttgaaggga tggaagaaag
1381 ctgtttcaca gaagctgtgt catctttatc agcactcata caggaatatg accaactgga
1441 cgccacaaaa aacatgcctg tgcaggattt acgcagacta agcatagcta tgtgaaaaag
1501 aaaccctcaa aaatactttc ttaatttcac attgtttttt ctgacctttc tgtttcaaca
1561 tttttgtaat ttggaaactc cagttttttc atattatcgg gaaatatttt tgtctaaaag
1621 agtgatttct gtttaatcgc aatttgttgg taataccaat gtgtgaaatt agtgaaatct
1681 tagtacctta acttcaaaca tttctcttca gaaaagttcc cttttctaaa attgagataa
1741 catagttctt gaatattttg ctgtatttat agcctcatat ttaggcattt atgcactgat
1801 gtgtcttcaa taaaaatctt gtacagatat atttttataa ttatttataa tttatatttt
1861 gatattctat ttaagttatc ctgattcttt aaaagtagtt attgggagta gaagaacaca
1921 atataaatat ttccgtgtaa tagccaccaa cttttcaggc ataggtttta ttacaactgt
1981 taaggaggtt ttgcttcttc tttagataac aacttgtttg cccaaaagaa tcctaaattg
2041 tacacttaac atgtatttgt attaaacttt ttaaataatt gctttcttat caaaaaaaaa
2101 aaaa
//