LOCUS BC031090 1985 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens RALY RNA binding protein-like, mRNA (cDNA clone
MGC:33847 IMAGE:5311935), complete cds.
ACCESSION BC031090
VERSION BC031090.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1985)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1985)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255191.
FEATURES Location/Qualifiers
source 1..1985
/db_xref="H-InvDB:HIT000041243"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33847 IMAGE:5311935"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1985
/gene="RALYL"
/gene_synonym="HNRPCL3"
/db_xref="GeneID:138046"
/db_xref="HGNC:HGNC:27036"
CDS 163..1038
/gene="RALYL"
/gene_synonym="HNRPCL3"
/codon_start=1
/product="RALYL protein"
/protein_id="AAH31090.1"
/db_xref="GeneID:138046"
/db_xref="HGNC:HGNC:27036"
/translation="MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSK
YGKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINMAGEPKPYRPKPGN
KRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPR
VAVTTTRRGKGVFSMKGGSRSTASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLE
KIEKQQKAEAEAQKKQLEESLVLIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEE
DFDEDGGHELFLQIK"
BASE COUNT 634 a 375 c 426 g 550 t
ORIGIN
1 ggcgagaccg catattccgg aggggctggc tccaggccac gcgagccgga gctggagaca
61 tttccagagc cttgaggatg gcaccggccc tcgcacgctc aactcctgct cctcctcttc
121 gcaatgagta aacgacgcag attaaagcaa ggagagccaa tcatgactgg caaaacacag
181 accagcaacg tcaccaataa gaatgacccc aagtccatca actcccgtgt tttcatcggc
241 aatctaaata cggcaattgt caagaaagtt gacattgaag ccattttttc aaagtatgga
301 aaaatagttg gatgttccgt tcacaaaggt tatgcatttg tacagtacat gagtgagcga
361 catgcaagag ctgcagtggc tggagaaaat gccagagtca tcgccggcca accacttgat
421 atcaacatgg caggagagcc caaaccatac agaccaaaac ctggaaacaa gaggcccctt
481 tctgcacttt acagacttga atcaaaggaa cctttcctgt ctgttggcgg ttatgtcttt
541 gactatgatt actacagaga tgatttctac aatcggttat ttgattacca cgggcgtgtg
601 cctccacctc cccgtgcagt aattccgctg aagcgtccca gagtggcagt cacaacgact
661 cgcaggggga aaggagtctt ttccatgaaa ggtggatcga gatctactgc cagtgggtca
721 acaggttcta aattgaaatc agatgagtta cagaccatca agaaagaatt aacccagatc
781 aaaactaaaa ttgactcctt gctagggcgc ctggagaaga ttgagaaaca gcagaaggcg
841 gaggcagaag ctcagaagaa gcaattggaa gagagtctag tgctgatcca agaggaatgt
901 gtgtcagaga ttgcagatca ctctacagag gagcctgctg aaggagggcc agatgccgat
961 ggagaagaga tgacagatgg gatagaggag gacttcgatg aagatggggg tcatgagctg
1021 tttctacaga taaagtgatc tgaaataacg catgatgcca caaagcagaa aagagaaact
1081 gtgacaaccc ccagaaatgt gaaaggaggt ttcttactgg acagcagcat ctttggttca
1141 atttatataa aaacccaaat aaataaaatg gacagtattg ctcagtttta gaaattccat
1201 ttcttctatg ttttaagctg tacaattgtc aggtttttat ggtttaaatt gtaaatgtgt
1261 tttccccttt gctaattatg tttttttttt tcagtcttaa aatgtgaaag gcatttatga
1321 atggtaaggg aaacactata tacaaatgta tatttgtaaa agctattttt atgattagca
1381 tgtttcactg ttgatcatat ataaagtcag gtgatattgc aattctgtat ttaaagctta
1441 tttccaacaa tgtcatgtaa gaaaagatgc atcttatgct agtttttata atttatttat
1501 aatttatagt ttaaagtact tcagatcata atgataaaat acttgaaaaa gttatatttc
1561 tgccctgtat aagcaccctt tttattaata aagaatgcag atatttcaga tgtgatataa
1621 tagttaaaga actgttggtt tgatctgtga ttaagttgag catgctccgc tctactgaac
1681 taaatgatcc aattattact tcagtctggg tatgagattc catggacaag taaggactag
1741 attgccaagg aaaagactgt cttgcccttg gatccaaaag tttaaattag tgcatacatc
1801 atgtcatttc acctcctgtt cctaggaact ctccattccc aagcattgcc agtgttttcc
1861 agataatctt agctgttgtc ttgtgctgtg gaaatgggag aaaccatctt cacagactgt
1921 aggagaattc aacatataat ttcttaataa atactgtttc ttttaaaaca aaaaaaaaaa
1981 aaaaa
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