LOCUS BC031087 2264 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 1,
mRNA (cDNA clone MGC:33838 IMAGE:5289008), complete cds.
ACCESSION BC031087
VERSION BC031087.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2264)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2264)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: j Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59889570.
FEATURES Location/Qualifiers
source 1..2264
/db_xref="H-InvDB:HIT000041241"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33838 IMAGE:5289008"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2264
/gene="GABRG1"
/gene_synonym="MGC33838"
/db_xref="GeneID:2565"
/db_xref="HGNC:HGNC:4086"
/db_xref="MIM:137166"
CDS 89..1486
/gene="GABRG1"
/gene_synonym="MGC33838"
/codon_start=1
/product="gamma-aminobutyric acid (GABA) A receptor, gamma
1"
/protein_id="AAH31087.1"
/db_xref="GeneID:2565"
/db_xref="HGNC:HGNC:4086"
/db_xref="MIM:137166"
/translation="MGPLKAFLFSPFLLRSQSRGVRLVFLLLTLHLGNCVDKADDEDD
EDLTVNKTWVLAPKIHEGDITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPV
DPINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHW
ITTPNRLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEY
KWKKPSVEVADPKYWRLYQFAFVGLRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQ
TYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMD
LFVSVCFIFVFAALMEYGTLHYFTSNQKGKTATKDRKLKNKASMTPGLHPGSTLIPMN
NISVPQEDDYEYQCLEGKDCASFFCCFEDCRTGSWREGRIHIRIAKIDSYSRIFFPTA
FALFNLVYWVGYLYL"
BASE COUNT 709 a 378 c 420 g 757 t
ORIGIN
1 ggtactcagc cagctgctgc tgaggtggga ggaaaagtcc tggctgggag aattgagcta
61 gtgcagcaca cgtaaaaaag cgattccgat gggtcctttg aaagcttttc tcttctcccc
121 ttttcttctg cggagtcaaa gtagaggggt gaggttggtc ttcttgttac tgaccctgca
181 tttgggaaac tgtgttgata aggcagatga tgaagatgat gaggatttaa cggtgaacaa
241 aacctgggtc ttggccccaa aaattcatga aggagatatc acacaaattc tgaattcatt
301 gcttcaaggc tatgacaata aacttcgtcc agatatagga gtgaggccca cagtaattga
361 aactgatgtt tatgtaaaca gcattggacc agttgatcca attaatatgg aatatacaat
421 agatataatt tttgcccaaa cctggtttga cagtcgttta aaattcaata gtaccatgaa
481 agtgcttatg cttaacagta atatggttgg aaaaatttgg attcctgaca ctttcttcag
541 aaactcaaga aaatctgatg ctcactggat aacaactcct aatcgtctgc ttcgaatttg
601 gaatgatgga cgagttctgt atactctaag attgacaatt aatgcagaat gttatcttca
661 gcttcataac tttcccatgg atgaacattc ctgtccactg gaattttcaa gctatggata
721 ccctaaaaat gaaattgagt ataagtggaa aaagccctcc gtagaagtgg ctgatcctaa
781 atactggaga ttatatcagt ttgcatttgt agggttacgg aactcaactg aaatcactca
841 cacgatctct ggggattatg ttatcatgac aatttttttt gacctgagca gaagaatggg
901 atatttcact attcagacct acattccatg cattctgaca gttgttcttt cttgggtgtc
961 tttttggatc aataaagatg cagtgcctgc aagaacatcg ttgggtatca ctacagttct
1021 gactatgaca accctgagta caattgccag gaagtcttta cctaaggttt cttatgtgac
1081 tgcgatggat ctctttgttt ctgtttgttt catttttgtt tttgcagcct tgatggaata
1141 tggaaccttg cattatttta ccagcaacca aaaaggaaag actgctacta aagacagaaa
1201 gctaaaaaat aaagcctcga tgactcctgg tctccatcct ggatccactc tgattccaat
1261 gaataatatt tctgtgccgc aagaagatga ttatgagtat cagtgtttgg agggcaaaga
1321 ttgtgccagc ttcttctgtt gctttgaaga ctgcagaaca ggatcttgga gggaaggaag
1381 gatacacata cgcattgcca aaattgactc ttattctaga atatttttcc caaccgcttt
1441 tgccctgttc aacttggttt attgggttgg ctatctttac ttataaaatc tacttcataa
1501 gcaaaaatca aaagaagtct gactaaattc agtagaatct tttgtgcttc agtaacttga
1561 agtttaaatt taaaatgcag agagaccaat ggttaaaatg tgaatagtat tgtaactatt
1621 ttaaggcctt cagaagtaaa taaagtagca gctttcaggc taatttacgt gaaactgatt
1681 agttgcaaaa tccagtaggt taaaatactc acatattttt acttaaattt tctttaattt
1741 acttatatgt tattataatt ttgaattttt aagttctatg attcatgttt taaagatgga
1801 ataattttaa tacatatttt gtttaaatat aatctataat tgttttgtaa tgtaagacta
1861 attactaata tttatgtagc aacttttgtg ccagaaaaaa gactgttaat ttgttttttc
1921 ttgcttttca tttgattacc ctgcttgaaa tacagttagt tgataacata aagccatagt
1981 tttcttggat tttcttccaa gatattgtat tcccaagaag aaattgattt atttttaaac
2041 tatcagttac tgaagactta tgaaaaggtc aatttttacc tgtcttttaa tccagtccat
2101 tttctgacac aatattaaac agaacgccag ttgcatttac tttggtgatt tgcaaacttg
2161 gaatgaagcc accagtcatt ttttaagaat gcaagatgaa aaaatcaggt aaaatctaac
2221 cattttattc tctgcttcat agcattctaa aaaaaaaaaa aaaa
//