LOCUS BC031085 2602 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens peroxisomal biogenesis factor 12, mRNA (cDNA clone
MGC:33813 IMAGE:5296541), complete cds.
ACCESSION BC031085
VERSION BC031085.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2602)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2602)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505720.
FEATURES Location/Qualifiers
source 1..2602
/db_xref="H-InvDB:HIT000051015"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33813 IMAGE:5296541"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2602
/gene="PEX12"
/db_xref="GeneID:5193"
/db_xref="HGNC:HGNC:8854"
/db_xref="MIM:601758"
CDS 521..1600
/gene="PEX12"
/codon_start=1
/product="peroxisomal biogenesis factor 12"
/protein_id="AAH31085.1"
/db_xref="GeneID:5193"
/db_xref="HGNC:HGNC:8854"
/db_xref="MIM:601758"
/translation="MAEHGAHFTAASVADDQPSIFEVVAQDSLMTAVRPALQHVVKVL
AESNPTHYGFLWRWFDEIFTLLDLLLQQHYLSRTSASFSENFYGLKRIVMGDTHKSQR
LASAGLPKQQLWKSIMFLVLLPYLKVKLEKLVSSLREEDEYSIHPPSSRWKRFYRAFL
AAYPFVNMAWEGWFLVQQLRYILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPAKA
SMMQQPARSVSEKINSALKKAVGGVALSLSTGLSVGVFFLQFLDWWYSSENQETIKSL
TALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFHYVR
SHQACPITGYPTEVQHLIKLYSPEN"
BASE COUNT 732 a 558 c 567 g 745 t
ORIGIN
1 ggtgtcgtgg gttgtttgcg cctcgcctgg ggtcagcgag caaggacggg cgcgggcggg
61 gatactcaaa gccaacagct ggagtcagcc cttgtgtccc gggctcacag tggcacgact
121 gaatcctcag agtcggctgg cttttgagct ctcacgattg gggaggaggg ggcgtttctg
181 gttcgcagct ccagaggatt gcgttccttc ccccatacct gtcccccaca gtcacgctct
241 gccctgacgt gcagcatttg acaagttacc ccctcgccac atactacttc cacccacgtc
301 cgagttaact ttgttcttaa ccttcttgag actaccctcg gcctccaggt ctttttttcc
361 cagttcattt ttgcccataa gattgagttt cgagtttcag atatcatgca gaaagtttac
421 ctttaagact gagcacccat ctgatactct tcctcccgaa aaagttcatg ctcacgagag
481 agtttgtggg aaaagtgaaa gccagtacac gcaggaaact atggctgagc acggggctca
541 cttcacagct gcttctgtgg ccgatgacca gccatccatc tttgaggtgg tagcacagga
601 cagtttaatg acagcagtga gacccgctct tcagcatgtg gtcaaggttc ttgcagaatc
661 aaatcccacc cactatggct tcttgtggag gtggtttgat gaaatcttta ctctgctaga
721 tcttctgctc cagcaacatt atctgtctag aaccagtgcc tcattttctg aaaactttta
781 cggcttaaag agaattgtaa tgggggacac tcacaagtct cagagattgg ctagtgctgg
841 tctcccaaag cagcagcttt ggaaatctat tatgttcctg gttcttcttc cctatctgaa
901 agtgaagctg gagaagctgg tttctagctt gagagaagag gatgaatatt ctattcatcc
961 cccttcttcc cgctggaaac gattttacag agctttcctg gcagcctacc catttgtgaa
1021 catggcctgg gaaggatggt ttcttgtaca acaacttcga tacatcctag gaaaagctca
1081 gcatcactca ccactgctga ggctggctgg agttcagcta ggtcgactga cagttcagga
1141 tatacaagct ctggagcaca aaccagctaa ggccagcatg atgcagcaac cagccaggag
1201 tgttagtgag aagataaact cagctctgaa gaaagctgtt gggggtgttg ccttatccct
1261 gtctactggc ctttctgtgg gtgtattctt cttgcagttc cttgactggt ggtactcatc
1321 tgaaaatcaa gaaaccatca agtcattgac tgccctgcct actccaccac cacctgtaca
1381 cctagactat aactctgatt ctcccctctt acccaaaatg aagactgtgt gcccactgtg
1441 tcgtaaaacc cgggtgaatg atactgttct tgccacctct ggctatgtgt tttgttaccg
1501 ctgtgtgttt cattatgtga ggagtcacca agcttgtccc atcacaggtt atccaacaga
1561 agtacaacat ctgattaaac tctactcccc tgagaactga aagggaatca tgtcttatcc
1621 tcacaacaaa agtattgcgc tgtaatgtca cagagctggt ttcagcatgg tattgagttg
1681 acacttctca gcctcaattc ataactatat gaactttaaa tgattatatg gatttcttta
1741 aaaggatatg cccatttgat cctaaacttt tagcctgctc tctagaaccc tacttacagt
1801 tgaccaagct gcttaaagta gaaggatcag gactggcagg ggatatgagg gccagtgtag
1861 agattaaaca gaataatgag tacacaagtt tttgcctatc cctttcctta aaatataaga
1921 aataaaggag ctcttacgaa aaacccaggt tagaccgcat aaaaaataaa gtgaacagtg
1981 aggtggtagc aagacttctt tttagaaaag aaagcattta cctgcctgtc tgtaaggtgg
2041 aaatttcatc agtttgcaaa cgataagaaa tgcagacttg ctcttgatag aaatgcttag
2101 aaacactctg ggggggaaaa aagctccttc catatactgt gagacatttg ttaagtgaca
2161 tctattgttt atcagctttt aaggataaaa aaggtatttt aaaagttgga tatttaggat
2221 atttgaggat attcctttat gagctctcca tatccttctt gagaaactgg ttaaaaaagg
2281 aataggggtt gagtgttaca gagagtagtc tgaagattcc tgtgtaaaag caaagctaac
2341 aagcaatgaa gacatgaagc aaaatactaa tctaattgtg taaagaaagg atattttaat
2401 aagttctttc tgcttgctgc taagagtttg ctaaactgtc atgaattatt ctggttatta
2461 ctaaagtttc tatgaaacac ttaagtagat tttaagaata aatgtttctg gaaaagaact
2521 atgttatgat tttgtagaaa tgtaaagatt acttgaggtg tttaaaataa atttttcatt
2581 cagaccaaaa aaaaaaaaaa aa
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