LOCUS BC031084 2979 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens perilipin, mRNA (cDNA clone MGC:33812 IMAGE:5284402),
complete cds.
ACCESSION BC031084
VERSION BC031084.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2979)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2979)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54112124.
FEATURES Location/Qualifiers
source 1..2979
/db_xref="H-InvDB:HIT000041240"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33812 IMAGE:5284402"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2979
/gene="PLIN"
/gene_synonym="PERI"
/db_xref="GeneID:5346"
/db_xref="HGNC:HGNC:9076"
/db_xref="MIM:170290"
CDS 125..1693
/gene="PLIN"
/gene_synonym="PERI"
/codon_start=1
/product="perilipin"
/protein_id="AAH31084.1"
/db_xref="GeneID:5346"
/db_xref="HGNC:HGNC:9076"
/db_xref="MIM:170290"
/translation="MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTST
KEAHPLVASVCNAYEKGVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKI
PALQYPPEKIASELKDTISTRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDT
AEFAANTRAGRLASGGADLALGSIEKVVEYLLPADKEESAPAPGHQQAQESPKAKPSL
LSRVGALTNTLSRYTVQTMARALEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRR
SEVRVPWLHSLAAAQEEDHEDQTDTEGEDTEEEEELETEENKFSEVAALPGPRGLLGG
VAHTLQKTLQTTISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTD
NVVDTVVHYVPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLA
QPRRSLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSDSFFRPSVMEP
ILGRTHYSQLRKKS"
BASE COUNT 702 a 829 c 795 g 653 t
ORIGIN
1 agtctgggct ctgtgagact gaggtggcgg tcagccggag tgagtgttgg ggtcctgggg
61 cacctgcctt acatggcttg tttatgaaca ttaaagggaa gaagttgaag cttgaggagc
121 gaggatggca gtcaacaaag gcctcacctt gctggatgga gacctccctg agcaggagaa
181 tgtgctgcag cgggtcctgc agctgccggt ggtgagtggc acctgcgaat gcttccagaa
241 gacctacacc agcactaagg aagcccaccc actggtggcc tctgtgtgca atgcctatga
301 gaagggcgtg cagagcgcca gtagcttggc tgcctggagc atggagccgg tggtccgcag
361 gctgtccacc cagttcacag ctgccaatga gctggcctgc cgaggcttgg accacctgga
421 ggaaaagatc cccgccctcc agtacccccc tgaaaagatt gcttctgagc tgaaggacac
481 catctccacc cgcctccgca gtgccagaaa cagcatcagc gttcccatcg cgagcacttc
541 agacaaggtc ctgggggccg ctttggccgg gtgcgagctt gcctgggggg tggccagaga
601 cactgcggaa tttgctgcca acactcgagc tggccgactg gcttctggag gggccgactt
661 ggccttgggc agcattgaga aggtggtgga gtacctcctc cctgcagaca aggaagagtc
721 agcccctgct cctggacacc agcaagccca ggagtctccc aaggccaagc caagcctctt
781 gagcagggtt ggggctctga ccaacaccct ctctcgatac accgtgcaga ccatggcccg
841 ggccctggag cagggccaca cagtggccat gtggatccca ggcgtggtgc ccctgagcag
901 cctggcccag tggggtgcct cagtggccat gcaggcggtg tcccggcgga ggagcgaagt
961 gcgggtaccc tggctgcaca gcctcgcagc cgcccaggag gaggatcatg aggaccagac
1021 agacacggag ggagaggaca cggaggagga ggaagaattg gagactgagg agaacaagtt
1081 cagtgaggta gcagccctgc caggccctcg aggcctcctg ggtggtgtgg cacataccct
1141 gcagaagacc ctccagacca ccatctcggc tgtgacatgg gcacctgcag ctgtgctggg
1201 catggcaggg agggtgctgc acctcacacc agcccccgct gtctcctcaa ccaaggggag
1261 ggccatgtcc ctatcagatg ccctgaaggg cgttactgac aacgtggtgg acacagtggt
1321 gcattacgtg ccgctcccca ggctgtcgct gatggagccc gagagcgaat tccgggacat
1381 cgacaaccca ccagccgagg tcgagcgccg ggaggcggag cgcagagcgt ctggggcgcc
1441 gtccgccggc ccggagcccg ccccgcgtct cgcacagccc cgccgcagcc tgcgcagcgc
1501 gcagagcccc ggcgcgcccc ccggcccggg cctggaggac gaagtcgcca cgcccgcagc
1561 gccgcgcccg ggcttcccgg ccgtgccccg cgagaagcca aagcgcaggg tcagcgacag
1621 cttcttccgg cccagcgtca tggagcccat cctgggccgc acgcattaca gccagctgcg
1681 caagaagagc tgagtcgccg caccagccgc cgcgccccgg gccggcgggt ttctctaaca
1741 aataaacaga acccgcactg cccaggcgag cgttgccact ttcaaagtgg tcccctgggg
1801 agctcagcct catcctgatg atgctgccaa ggcgcacttt ttatttttat tttattttta
1861 tttttttttt agcatccttt tggggcttca ctctcagagc cagtttttaa gggacaccag
1921 agccgcagcc tgctctgatt ctatggcttg gttgttacta taagagtaat tgcctaactt
1981 gatttttcat ctctttaacc aaacttgtgg ccaaaagata tttgaccgtt tccaaaattc
2041 agattctgcc tctgcggata aatatttgcc acgaatgagt aactcctgtc accactctga
2101 aggtccagac agaaggtttt gacacattct tagcactgaa ctcatctgtg atctaggatg
2161 atctgttccc cctctgatga acatcctctg atgatctagg ctcccagcag gctactttga
2221 agggaacaat cagatgcaaa agctcttggg tgtttattta aaatactagt gtcactttct
2281 gagtacccgc cgcttcacag gctgagtcca ggcctgtgtg ctttgtagag ccagctgctt
2341 gctcacagcc acatttccat ttgcatcatt actgccttca cctgcatagt cactcttttg
2401 atgctgggga accaaaatgg tgatgatata tagactttat gtatagccac agttcatccc
2461 caaccctagt cttcgaaatg ttaatatttg ataaatctag aaaatgcatt catacaatta
2521 cagaattcaa atattgcaaa aggatgtgtg tctttctccc cgagctcccc tgttcccctt
2581 cattgaaaac caccacggtg ccatctcttg tgtatgcagg gctatgcacc tgcaggcacg
2641 tgtgtatgca ctccccgctt gtgtttacac aagctgtggg gtgttacgca tgcctttttt
2701 tcacttaata atacagcttg gagagatttt tgtatcacat tataaatccc actcgctctt
2761 tttgatggcc acataataac tactgcataa tatggatacg ccttatttga tttaactagt
2821 tccctaatga tggactttta agttgtttcc tttttttttc ttttttgcta ctgcaaacga
2881 tgctataata aatgtcctta tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaggaaaaa aaaaaaaaa
//