LOCUS       BC031059                2391 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens Leber congenital amaurosis 5-like, mRNA (cDNA clone
            MGC:33295 IMAGE:5271223), complete cds.
ACCESSION   BC031059
VERSION     BC031059.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2391)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 25, 2003 this sequence version replaced BC031059.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 48 Row: b Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 53832012.
FEATURES             Location/Qualifiers
     source          1..2391
                     /db_xref="H-InvDB:HIT000041226"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33295 IMAGE:5271223"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2391
                     /gene="LCA5L"
                     /db_xref="GeneID:150082"
                     /db_xref="HGNC:HGNC:1255"
     CDS             315..2327
                     /gene="LCA5L"
                     /codon_start=1
                     /product="Leber congenital amaurosis 5-like"
                     /protein_id="AAH31059.1"
                     /db_xref="GeneID:150082"
                     /db_xref="HGNC:HGNC:1255"
                     /translation="MSLADLTKTNIDEHFFGVALENNRRSAACKRSPGTGDFSRNSNA
                     SNKSVDYSRSQCSCGSLSSQYDYSEDFLCDCSEKAINRNYLKQPVVKEKEKKKYNVSK
                     ISQSKGQKEISVEKKHTWNASLFNSQIHMIAQRRDAMAHRILSARLHKIKGLKNELAD
                     MHHKLEAILTENQFLKQLQLRHLKAIGKYENSQNNLPQIMAKHQNEVKNLRQLLRKSQ
                     EKERTLSRKLRETDSQLLKTKDILQALQKLSEDKNLAEREELTHKLSIITTKMDANDK
                     KIQSLEKQLRLNCRAFSRQLAIETRKTLAAQTATKTLQVEVKHLQQKLKEKDRELEIK
                     NIYSHRILKNLHDTEDYPKVSSTKSVQADRKILPFTSMRHQGTQKSDVPPLTTKGKKA
                     TGNIDHKEKSTEINHEIPHCVNKLPKQEDSKRKYEDLSGEEKHLEVQILLENTGRQKD
                     KKEDQEKKNIFVKEEQELPPKIIEVIHPERESNQEDVLVREKFKRSMQRNGVDDTLGK
                     GTAPYTKGPLRQRRHYSFTEATENLHHGLPASGGPANAGNMRYSHSTGKHLSNREEME
                     LEHSDSGYEPSFGKSSRIKVKDTTFRDKKSSLMEELFGSGYVLKTDQSSPGVAKGSEE
                     PLQSKESHPLPPSQASTSHAFGDSKVTVVNSIKPSSPTEGKRKIII"
BASE COUNT          945 a          427 c          462 g          557 t
ORIGIN      
        1 gagaagcacc aaaagaggca aactgagatg cagacaaatg atcatccgta tgctgatcat
       61 tttgaatagt tttttaaaat atattctttc tttaaaaaga gaccaaaacc tgtcaaaaaa
      121 aatactaccg tggaaagctc ataaatacta cagtgtgaag aaccctgtgc ttatcttcag
      181 tttatcatca gacatcttag ggaagtttaa taaagaacac caggagaatt gagaattaaa
      241 tgaaaaggta aatcctttta aagacctcag aagatggatc tgtttgtttc aatctgcttt
      301 tgaggttgtt tgctatgtct ttggctgatc taacaaaaac aaatatagat gagcatttct
      361 tcggcgtggc attagaaaac aataggaggt ctgcagcatg caagagaagc ccaggcacag
      421 gcgatttttc acggaacagt aatgcttcca ataagagtgt tgattatagc agatctcagt
      481 gctcctgtgg aagtttaagt tctcagtatg attattcaga agactttctc tgtgattgtt
      541 cagaaaaggc tattaataga aattatttaa agcagcctgt ggtaaaagaa aaggagaaga
      601 aaaagtataa tgtttctaaa atctcccaat ctaaaggcca gaaggaaata tcagttgaaa
      661 aaaagcacac ctggaatgca tcactcttta attctcaaat ccatatgatt gcccaaagaa
      721 gagatgctat ggctcatcga atactctcag caaggcttca taaaattaaa ggactaaaaa
      781 atgaattagc tgatatgcat cataaattgg aagccatcct tacagaaaac caatttttga
      841 aacaacttca gcttaggcat ttgaaagcta taggaaaata tgagaattca caaaataatc
      901 tacctcaaat tatggctaaa catcagaatg aagtaaaaaa tttaaggcaa ctacttagga
      961 aatcccagga aaaggaaaga actctatcta ggaaacttag agaaactgac agccagttac
     1021 tgaagactaa agatatcttg caggcactgc agaaactttc tgaagacaaa aaccttgcag
     1081 aaagggaaga actcactcat aaattatcta ttatcacaac aaaaatggac gcaaatgaca
     1141 aaaaaataca gagcttggaa aaacaactga ggttgaactg cagagccttt agccggcagc
     1201 tggctattga gactcggaag actttagcag ctcagacagc taccaagact ctgcaggtgg
     1261 aagtaaaaca ccttcaacaa aaacttaagg aaaaggatcg tgagcttgaa attaaaaaca
     1321 tctatagtca tcgaatactt aaaaatttac atgacacaga ggactatcca aaagtttctt
     1381 caacaaaatc agtccaagca gacagaaaaa ttttgccatt cacaagtatg agacaccagg
     1441 gaacccaaaa atcagatgtt ccacctttga caactaaggg taaaaaggca acaggaaaca
     1501 tcgatcataa agaaaaatca actgaaataa atcatgaaat tcctcactgt gtgaataaac
     1561 taccaaagca agaggattct aagagaaaat atgaagattt atcaggggaa gagaaacatt
     1621 tggaagtcca aatactgctg gagaatactg gaagacaaaa agacaaaaaa gaagaccaag
     1681 aaaagaaaaa catttttgtg aaagaagagc aagaactacc accaaaaata attgaagtta
     1741 ttcatcctga aagagaaagc aatcaagaag atgttctagt aagagaaaag tttaaaagaa
     1801 gcatgcagag aaatggtgtg gatgacacac ttggcaaagg cactgctccc tacacgaaag
     1861 gccccctcag acaaagaaga cattactcat tcacagaagc aactgaaaac ctgcatcatg
     1921 ggcttcctgc ttcagggggg ccagccaatg ccggcaacat gaggtacagt catagtacag
     1981 gcaagcatct cagtaacaga gaggaaatgg agctagagca ttctgacagt gggtatgagc
     2041 cctcatttgg taagtcttcc agaataaaag tgaaggatac aactttcaga gataagaaaa
     2101 gcagtctcat ggaagaactc tttggatcag gctatgtctt gaaaactgac caatcaagtc
     2161 ctggtgttgc aaaaggctca gaggagcctt tgcaaagtaa ggagtcgcat cccctgcctc
     2221 ccagtcaggc ctccaccagc catgctttcg gagactctaa agtaactgtg gtaaattcta
     2281 ttaagccatc gtcacctaca gaaggaaaaa gaaaaataat tatttaaata taatcaatat
     2341 cctaatgcat tctggtttga tataaaaaaa aaaaagaaaa aaaaaaaaaa a
//