LOCUS BC031059 2391 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens Leber congenital amaurosis 5-like, mRNA (cDNA clone MGC:33295 IMAGE:5271223), complete cds. ACCESSION BC031059 VERSION BC031059.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2391) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2391) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC031059.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: b Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 53832012. FEATURES Location/Qualifiers source 1..2391 /db_xref="H-InvDB:HIT000041226" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33295 IMAGE:5271223" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2391 /gene="LCA5L" /db_xref="GeneID:150082" /db_xref="HGNC:HGNC:1255" CDS 315..2327 /gene="LCA5L" /codon_start=1 /product="Leber congenital amaurosis 5-like" /protein_id="AAH31059.1" /db_xref="GeneID:150082" /db_xref="HGNC:HGNC:1255" /translation="MSLADLTKTNIDEHFFGVALENNRRSAACKRSPGTGDFSRNSNA SNKSVDYSRSQCSCGSLSSQYDYSEDFLCDCSEKAINRNYLKQPVVKEKEKKKYNVSK ISQSKGQKEISVEKKHTWNASLFNSQIHMIAQRRDAMAHRILSARLHKIKGLKNELAD MHHKLEAILTENQFLKQLQLRHLKAIGKYENSQNNLPQIMAKHQNEVKNLRQLLRKSQ EKERTLSRKLRETDSQLLKTKDILQALQKLSEDKNLAEREELTHKLSIITTKMDANDK KIQSLEKQLRLNCRAFSRQLAIETRKTLAAQTATKTLQVEVKHLQQKLKEKDRELEIK NIYSHRILKNLHDTEDYPKVSSTKSVQADRKILPFTSMRHQGTQKSDVPPLTTKGKKA TGNIDHKEKSTEINHEIPHCVNKLPKQEDSKRKYEDLSGEEKHLEVQILLENTGRQKD KKEDQEKKNIFVKEEQELPPKIIEVIHPERESNQEDVLVREKFKRSMQRNGVDDTLGK GTAPYTKGPLRQRRHYSFTEATENLHHGLPASGGPANAGNMRYSHSTGKHLSNREEME LEHSDSGYEPSFGKSSRIKVKDTTFRDKKSSLMEELFGSGYVLKTDQSSPGVAKGSEE PLQSKESHPLPPSQASTSHAFGDSKVTVVNSIKPSSPTEGKRKIII" BASE COUNT 945 a 427 c 462 g 557 t ORIGIN 1 gagaagcacc aaaagaggca aactgagatg cagacaaatg atcatccgta tgctgatcat 61 tttgaatagt tttttaaaat atattctttc tttaaaaaga gaccaaaacc tgtcaaaaaa 121 aatactaccg tggaaagctc ataaatacta cagtgtgaag aaccctgtgc ttatcttcag 181 tttatcatca gacatcttag ggaagtttaa taaagaacac caggagaatt gagaattaaa 241 tgaaaaggta aatcctttta aagacctcag aagatggatc tgtttgtttc aatctgcttt 301 tgaggttgtt tgctatgtct ttggctgatc taacaaaaac aaatatagat gagcatttct 361 tcggcgtggc attagaaaac aataggaggt ctgcagcatg caagagaagc ccaggcacag 421 gcgatttttc acggaacagt aatgcttcca ataagagtgt tgattatagc agatctcagt 481 gctcctgtgg aagtttaagt tctcagtatg attattcaga agactttctc tgtgattgtt 541 cagaaaaggc tattaataga aattatttaa agcagcctgt ggtaaaagaa aaggagaaga 601 aaaagtataa tgtttctaaa atctcccaat ctaaaggcca gaaggaaata tcagttgaaa 661 aaaagcacac ctggaatgca tcactcttta attctcaaat ccatatgatt gcccaaagaa 721 gagatgctat ggctcatcga atactctcag caaggcttca taaaattaaa ggactaaaaa 781 atgaattagc tgatatgcat cataaattgg aagccatcct tacagaaaac caatttttga 841 aacaacttca gcttaggcat ttgaaagcta taggaaaata tgagaattca caaaataatc 901 tacctcaaat tatggctaaa catcagaatg aagtaaaaaa tttaaggcaa ctacttagga 961 aatcccagga aaaggaaaga actctatcta ggaaacttag agaaactgac agccagttac 1021 tgaagactaa agatatcttg caggcactgc agaaactttc tgaagacaaa aaccttgcag 1081 aaagggaaga actcactcat aaattatcta ttatcacaac aaaaatggac gcaaatgaca 1141 aaaaaataca gagcttggaa aaacaactga ggttgaactg cagagccttt agccggcagc 1201 tggctattga gactcggaag actttagcag ctcagacagc taccaagact ctgcaggtgg 1261 aagtaaaaca ccttcaacaa aaacttaagg aaaaggatcg tgagcttgaa attaaaaaca 1321 tctatagtca tcgaatactt aaaaatttac atgacacaga ggactatcca aaagtttctt 1381 caacaaaatc agtccaagca gacagaaaaa ttttgccatt cacaagtatg agacaccagg 1441 gaacccaaaa atcagatgtt ccacctttga caactaaggg taaaaaggca acaggaaaca 1501 tcgatcataa agaaaaatca actgaaataa atcatgaaat tcctcactgt gtgaataaac 1561 taccaaagca agaggattct aagagaaaat atgaagattt atcaggggaa gagaaacatt 1621 tggaagtcca aatactgctg gagaatactg gaagacaaaa agacaaaaaa gaagaccaag 1681 aaaagaaaaa catttttgtg aaagaagagc aagaactacc accaaaaata attgaagtta 1741 ttcatcctga aagagaaagc aatcaagaag atgttctagt aagagaaaag tttaaaagaa 1801 gcatgcagag aaatggtgtg gatgacacac ttggcaaagg cactgctccc tacacgaaag 1861 gccccctcag acaaagaaga cattactcat tcacagaagc aactgaaaac ctgcatcatg 1921 ggcttcctgc ttcagggggg ccagccaatg ccggcaacat gaggtacagt catagtacag 1981 gcaagcatct cagtaacaga gaggaaatgg agctagagca ttctgacagt gggtatgagc 2041 cctcatttgg taagtcttcc agaataaaag tgaaggatac aactttcaga gataagaaaa 2101 gcagtctcat ggaagaactc tttggatcag gctatgtctt gaaaactgac caatcaagtc 2161 ctggtgttgc aaaaggctca gaggagcctt tgcaaagtaa ggagtcgcat cccctgcctc 2221 ccagtcaggc ctccaccagc catgctttcg gagactctaa agtaactgtg gtaaattcta 2281 ttaagccatc gtcacctaca gaaggaaaaa gaaaaataat tatttaaata taatcaatat 2341 cctaatgcat tctggtttga tataaaaaaa aaaaagaaaa aaaaaaaaaa a //