LOCUS       BC031051                3057 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens cadherin 18, type 2, mRNA (cDNA clone MGC:33098
            IMAGE:5278717), complete cds.
ACCESSION   BC031051
VERSION     BC031051.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3057)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 48 Row: h Column: 3
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 16445394.
FEATURES             Location/Qualifiers
     source          1..3057
                     /db_xref="H-InvDB:HIT000041220"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33098 IMAGE:5278717"
                     /tissue_type="Brain, hypothalamus"
                     /clone_lib="NIH_MGC_96"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3057
                     /gene="CDH18"
                     /gene_synonym="CDH14"
                     /gene_synonym="CDH14L"
                     /gene_synonym="CDH24"
                     /gene_synonym="EY-CADHERIN"
                     /db_xref="GeneID:1016"
                     /db_xref="HGNC:HGNC:1757"
                     /db_xref="MIM:603019"
     CDS             491..2863
                     /gene="CDH18"
                     /gene_synonym="CDH14"
                     /gene_synonym="CDH14L"
                     /gene_synonym="CDH24"
                     /gene_synonym="EY-CADHERIN"
                     /codon_start=1
                     /product="cadherin 18, type 2"
                     /protein_id="AAH31051.1"
                     /db_xref="GeneID:1016"
                     /db_xref="HGNC:HGNC:1757"
                     /db_xref="MIM:603019"
                     /translation="MKITSTSCICPVLVCLCFVQRCYGTAHHSSIKVMRNQTKHIEGE
                     TEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFI
                     IDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFT
                     DGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIR
                     TALHNMDGEAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQLY
                     VPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP
                     LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVDEPPLFSMPSYLMEV
                     YENAKIGTVVGTVLAQDPDSINSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREE
                     TPWYNITVTASEIDNPDLLSHVTVGIRVLDVNDNPPELAREYDIIVCENSKPGQVIHT
                     ISATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEDNTASILTRRRRFSRTVQDVYYL
                     PIMISDGGIPSLSSSSTLTIRVCACERDGRVRTCHAEAFLSSAGLSTGALIAILLCVL
                     ILLAIVVLFITLRRSKKEPLIISEEDVRENVVTYDDEGGGEEDTGAFDITALRNPSAA
                     EELKYRRDIRPEVKLTPRHQTSSTLESIDVQEFIKQRLAEADLDPSVPPYDSLQTYAY
                     EGQRSEAGSISSLDSATTQSDQDYHYLGDWGPEFKKLAELYGEIESERTT"
BASE COUNT          923 a          667 c          697 g          770 t
ORIGIN      
        1 gggtctgggc tttccgagga cggcgagcag ctgtgcccag agctctggga aagtcccctc
       61 tctttgcttc ttataaatta agttcctttc caccagttag ggcaagtccg ccaagataga
      121 ctgaagagga gcaagaacag aaacagggag ccagttacag atctatccca agaattctgg
      181 ggagagatga tggtgtctgc agcagagtga cagcagtgga gattgagaga aaaggttgaa
      241 aatggttgct tgtgttcaac tactgtgaag agttggaatc agacaactac ggcttttatt
      301 ttccaagtgg ttcagaatgt aaatatgatc tgacctttcc ctgatggaca gttaaatcat
      361 ggacacgcta aacaatttac tttggactgt ccttcctaaa gatgctctgg cttctctctt
      421 gaatgctcac taagctttcg tagctgacaa ggaaaggaag gaaaactgtg aactggaaag
      481 ttatcttaca atgaaaatta ctagcacatc ttgcatctgt ccagtcctag tgtgtctctg
      541 ttttgtgcag aggtgttatg gaactgctca ccacagctcc atcaaggtga tgagaaacca
      601 aaccaaacac attgaaggtg aaaccgaagt ccatcatcgt cccaaaaggg gatgggtatg
      661 gaatcagttc tttgttttag aagaacatat gggaccagat cctcagtatg ttggaaagct
      721 gcactccaat tctgacaaag gtgatggatc tgtcaagtac atccttactg gagagggtgc
      781 tgggactata tttatcattg acgataccac gggtgatatc cactcaacaa aaagcctaga
      841 cagagagcag aagacccact atgtgcttca tgctcaagct attgatagac gtacaaacaa
      901 acctcttgag cctgaatccg agttcatcat caaagtgcaa gacatcaatg acaacgctcc
      961 aaaattcaca gatggaccat acattgttac tgtgcctgaa atgtcagata tgggtacctc
     1021 tgttctacag gtgacagcta ctgatgcaga tgaccctacc tatggaaaca gcgctcgggt
     1081 ggtttacagc attctccagg gacaacccta cttctccgtc gaccctaaaa caggagttat
     1141 tagaacggcc ttacataaca tggacggaga agccagagaa cattactccg tagtcattca
     1201 agccaaagac atggctgggc aagttggagg gctttcagga tctacaacag tcaacatcac
     1261 cttaaccgat gtcaatgaca acacaccacg ctttcctcaa aaacactatc agctatatgt
     1321 tcctgagtca gctcaagttg gttcagctgt tgggaaaatc aaggcaaatg atgctgacac
     1381 tggctcaaat gctgacatga cctactccat cataaatggt gatggcatgg gaatattctc
     1441 aatctccact gacaaagaga ccagagaagg aatcctttct ttaaagaagc cactgaacta
     1501 tgagaaaaag aagtcatata ccctcaacat agaaggagca aatacacatc ttgattttcg
     1561 cttttctcac ttgggtcctt ttaaagatgc tactatgctg aagatcattg ttggggatgt
     1621 agatgaacca ccactatttt ccatgccttc ctacctcatg gaagtctacg aaaatgccaa
     1681 gattgggacc gtcgttggta cagttttggc acaagatcct gacagtatta acagcttagt
     1741 aagatacttc atcaactaca atgttgaaga cgacagattt ttcaacattg atgccaatac
     1801 tgggaccatt aggactacaa aggttctcga cagagaagaa actccatggt acaacatcac
     1861 agtcactgct tcagaaattg ataatcctga tttgctgagc catgtcacag tgggtattag
     1921 agttctggat gtcaatgaca atccacccga acttgccagg gaatatgata ttattgtatg
     1981 tgaaaattct aagcctggcc aggttattca taccatcagt gccactgata aagatgattt
     2041 tgccaatgga ccaaggttta acttctttct tgatgagcgc ctgcctgtaa atccaaactt
     2101 cactctgaag gacaatgaag ataacacagc cagcattctg acaaggcgga ggagatttag
     2161 tcgaactgtt caggatgtgt attatctgcc cattatgatc tctgatggtg gaatcccctc
     2221 tctcagcagc agcagcaccc tcaccatcag ggtttgtgca tgcgagagag atgggcgtgt
     2281 gcggacctgc catgcagaag ccttcctgtc ctcggctggt ttgagtacag gagccttaat
     2341 cgctattctt ctctgtgttc tcattctcct ggcaattgtg gtacttttta tcaccctgag
     2401 gcgcagcaaa aaagagccct tgatcatttc agaagaggat gtacgggaga acgtggtcac
     2461 ctatgatgat gaaggaggcg gagaggaaga cacaggggcc tttgacatca cagccttgag
     2521 gaatccttct gctgctgagg agctcaagta ccggagggat atcagacctg aagtgaagct
     2581 cactcccaga caccagacat catccaccct ggaaagcata gatgttcagg aatttattaa
     2641 gcaaagactg gcagaagcag acctagaccc tagcgttccc ccttatgact ctcttcagac
     2701 ttatgcctat gagggtcaga gatcagaagc tgggtctatc agctcgctgg attcagcaac
     2761 gacacaatca gaccaggatt atcactacct tggagactgg ggacccgagt ttaaaaagtt
     2821 agctgaactc tatggagaaa tagaatctga aagaacaact tagggggtca gttcttgcaa
     2881 ccttgtggaa tttgcttcct gagtaagtgg atatacaacc tcagcaatga caaggaagaa
     2941 gtgtggaaac agtacttgga actgaggaag ctggacacag ctcctgtaga aacaagtgcc
     3001 cttttcatga tcgaaactgg gttatttaat tggaagaaag caaaaaaaaa aaaaaaa
//