LOCUS       BC031050                2485 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens sorting nexin 10, mRNA (cDNA clone MGC:33054
            IMAGE:5278015), complete cds.
ACCESSION   BC031050
VERSION     BC031050.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2485)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 48 Row: h Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23111022.
FEATURES             Location/Qualifiers
     source          1..2485
                     /db_xref="H-InvDB:HIT000041219"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33054 IMAGE:5278015"
                     /tissue_type="Brain, hypothalamus"
                     /clone_lib="NIH_MGC_96"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2485
                     /gene="SNX10"
                     /gene_synonym="MGC33054"
                     /db_xref="GeneID:29887"
                     /db_xref="HGNC:HGNC:14974"
     CDS             110..715
                     /gene="SNX10"
                     /gene_synonym="MGC33054"
                     /codon_start=1
                     /product="sorting nexin 10"
                     /protein_id="AAH31050.1"
                     /db_xref="GeneID:29887"
                     /db_xref="HGNC:HGNC:14974"
                     /translation="MFPEQQKEEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMCFT
                     MKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNMNNRQHVDQRRQGLEDFL
                     RKVLQNALLLSYSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFPEED
                     EEGKKENDIDYDSESSSSGLGHSSDDSSSHGCKVNTAPQES"
BASE COUNT          836 a          402 c          431 g          816 t
ORIGIN      
        1 gctgtgcgcc tttgagtcag caaactccgc ggcccgcaag cccggctcgg cccggccctg
       61 ctctgttctg cccggaggag ccgcccattg atcgtgtcct gtgctgaaga tgtttccgga
      121 acaacagaaa gaggaatttg taagtgtctg ggttcgagat cctaggattc agaaggagga
      181 cttctggcat tcttacattg actatgagat atgtattcat actaatagca tgtgttttac
      241 aatgaaaaca tcctgtgtac gaagaagata tagagaattc gtgtggctga ggcagagact
      301 ccaaagtaat gcgttgctgg tacaactgcc agaacttcca tctaaaaacc tgtttttcaa
      361 catgaacaat cgccagcacg tggatcagcg tcgccagggt ctggaagatt tcctcagaaa
      421 agtcctacag aatgcacttt tgctttcata tagcagcctt cacctcttct tacagagcca
      481 tctgaattca gaagacattg aggcgtgtgt ttctgggcag actaagtact ctgtggaaga
      541 agcaattcac aagtttgcct taatgaatag acgtttccct gaagaagatg aagaaggaaa
      601 aaaagaaaat gatatagatt atgattcaga aagttcatcc tctgggcttg gacacagtag
      661 tgatgacagc agttcacatg gatgtaaagt aaatacagct ccgcaggaat cctgaaaaat
      721 aattctaatg ttactatctt aggaatagca aattatgtcc agtcatagag aagaaagctt
      781 cataataata cattcttacc taaagctcac tgtcatgatg ttaggtattt aaattcttaa
      841 agatgttggg ttgtttatta gtggtatttt tatgttgtct tattttaggt aagcttctgt
      901 gtaaagctaa aaatcctgtg aatacaatac tatcctttac aggcagacat tattggtaaa
      961 caagatcttg ccctccaatg aaatgactta catgttttaa aaaaccgagt tggttttatt
     1021 gaatttaaaa agataggtaa ctaagtagca tttaaaatca agatagagca ttccttcttg
     1081 tatcagtggg gcagtgttac cataaacacg gtgtatatgt tgttaaaccc tatgaagagt
     1141 aacagtgtag accagactgc ctctctcaga tatgtgcctg atattttgtg gatacctccc
     1201 ctgcactggc aaaacactat gcttttgggt gttagactga aatattttaa gagtatttaa
     1261 cctttccagt attctgtttc acgcttagat ggaaatgtat cttatgaata gagacatatt
     1321 aaaataatgt ttacatctta gaaaaaacat agatagtgct agtaatatta cttataactg
     1381 taatatatag attcagaaat acattttcat tatccaaaat cagcttcaac aaatggtttc
     1441 tggagacaaa taatttgttt tcattatcat tgtataatca ggttaatgat ttattttttg
     1501 actaaatgtg caatttctta tcactagata actttcagta tcagtggtgg ttacttatta
     1561 cttaaatcag aggaaggatt ttataaagat taataaattt aattttacca ttaaatattc
     1621 ccataattta gaaaaggatg tcgacttgct aatttcagaa ataattattc atttttaaaa
     1681 agcccgtttt aaagcatcta cttgaagatt ggtataattt tcataaaatg tctttttttt
     1741 tagtgtccca aagatatctt agataaacta ttttgaagtt cagatttcag atgaggcaac
     1801 attttcttga gataattacc caagtttcat ccatgttgaa tggtacaaaa tatttctgtg
     1861 aaactaacag gaagatattt tcagataact aggataactt gttgctttgt tacccagcct
     1921 aattgaagag tggcagaggc tactataaaa agcaaccttt tcattttcac taagagttta
     1981 aaagctattg tattattaaa aagtctttac aatgcttgtt tcaaagaacc aacagaaaaa
     2041 aaagctaaga aaactgagaa ctaacattaa aaaaattaaa tttagaataa gaatgatttc
     2101 tttaatttgt cctttttttc tttggtctaa aacattatta aatttttgta aatattttga
     2161 tttaatgtgt cttagatcct cattatttta atacaggaaa agaaaagatt tagtaatttc
     2221 ttaccatgct aatatgtaaa gttcatgcca tccaggcatt taagagcgat cctcatccct
     2281 tcagcaatat gtatttgagt tcacactatt tctgttttac agcagttttg aaaaacacat
     2341 actatgccac caattgtcat attattttta gatgatgtaa catagccatc aaaattaata
     2401 ttatgtaatg cctaatactt agtatgtaaa tgtcacgaga tcatttttac attaaacgtg
     2461 aaaaaaaacc aaaaaaaaaa aaaaa
//