LOCUS BC031041 1875 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens IQ motif containing H, mRNA (cDNA clone
IMAGE:5271948), complete cds.
ACCESSION BC031041
VERSION BC031041.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1875)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12232474
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1875
/db_xref="H-InvDB:HIT000041213"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5271948"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1875
/gene="IQCH"
/gene_synonym="DKFZp434F2114"
/gene_synonym="FLJ12476"
/db_xref="GeneID:64799"
/db_xref="HGNC:HGNC:25721"
/db_xref="IMGT/GENE-DB:25721"
/db_xref="MIM:25721"
CDS 235..1152
/gene="IQCH"
/gene_synonym="DKFZp434F2114"
/gene_synonym="FLJ12476"
/codon_start=1
/product="IQCH protein"
/protein_id="AAH31041.2"
/db_xref="GeneID:64799"
/db_xref="HGNC:HGNC:25721"
/db_xref="IMGT/GENE-DB:25721"
/db_xref="MIM:25721"
/translation="MIERGLIPPTARITFQNPPITPRAAPLHSFDEARKIPTVATFTI
PREPPPSPAEVKFFPKKQRSKGKSRRSRGHHDRKAMKVKTPLRALKSLWDYDFLIYDG
VIDNTAPDFLAFKEHFSLAWGGIFSLLEHVEKFLRNYAIPEVKIKGNNLVALLPEFEL
TNKLTRYDLLSVLEDPAHVQMLINLPGQRYKGQDGNSEAAMKIQATWKCYKARKFFLF
YRQQKWASGVIAIAWLLYCHKTRLKKILKESRQRHLENFRIRAKHLAANWNRIRTSRR
TIIHIPSLGITLLPANLSATSITHHIMAP"
BASE COUNT 624 a 364 c 390 g 497 t
ORIGIN
1 gtggttggaa accgcgcctc cgcggaggta gccgttccct gacctagcca tggcacagaa
61 cactgaaaac cacgaccctg tcggatccat cttaatccag atccatgaag acctttatca
121 gttaaaggag aaattaacaa aattctcacc tgaggaaaaa ggagagactc tagacattca
181 gagtcttgaa acagcaatca aagggactga agtggggtta agaggatttt aagtatgata
241 gaacgagggc tgattccacc aacagcaagg attacctttc agaatccacc cattacaccc
301 agagcagctc ctctgcatag ttttgatgaa gcacgtaaga ttccaactgt agccactttc
361 actatacctc gggaaccacc tccatctcca gcagaagtga agttctttcc caagaaacaa
421 agatcaaagg ggaaaagcag aaggtcaaga ggacatcatg ataggaaggc catgaaagtc
481 aaaacacctt tgagagccct gaaatcactg tgggattatg actttttaat ttatgatggt
541 gtcatagaca atacagcccc agacttctta gcattcaagg aacattttag cttagcttgg
601 ggaggtattt tttctctctt ggaacacgtc gagaagtttc tcaggaacta tgctatacca
661 gaagtcaaaa taaaagggaa taatttggtg gccctccttc cagagtttga gctgacgaat
721 aaacttacca gatatgacct tctctcagtg ttagaggacc cagctcatgt ccaaatgctg
781 ataaatcttc cagggcaaag gtacaagggc caagatggaa attcggaggc cgccatgaag
841 atccaagcca catggaaatg ctacaaagca agaaaattct tcctctttta tcgccagcag
901 aagtgggcat caggtgtgat tgccattgct tggctgttat attgccataa gactcgacta
961 aagaagatac taaaggaatc acgtcagaga cacctggaga attttcgcat tcgagccaag
1021 catctggcag ccaactggaa tcgcatcagg acctccagga ggactattat ccatatccca
1081 tcattaggta taacactttt gcctgcaaat ctatcagcaa cctctattac ccaccacatt
1141 atggctcctt gattgagttc aaggaaggcc ccttgtttta ttcaaattgg tctcggcagg
1201 aaaatgttct cgacatgatg agagtaataa cacaggaccc tcgcttggaa cggcgtttaa
1261 tttggggatt aagcaaataa agtcattatg tgggggctgc tattcagtgg agaggtgatt
1321 tgctgtaatt cgctttcatc tgtatgaaat gaactaaaaa gttgtatttt tccccgaaat
1381 aacagataat gttttcgatc ttctttaatg atagaagaac tcaggcttgt atgtgttgtt
1441 gctgttacgc caataagcca ggatattgct tgtacactgt ttttaatcaa atgtgcagtc
1501 aaaatgataa gctacattct ctgaaattat ttagttctaa ttacgagcag atgggatgct
1561 ttatttgcac ctagggcgcc tgagcaaaag gaaatgctgt gtgaacaaga ataattaaga
1621 agttgaatag tgttttttgc acttaaataa tctgcagttt catgttaatt agcactaatg
1681 taattattta attacattta tgaattgggg aacttaaaag ctgttgtctg aaacacactg
1741 gtaaaaaagg tatgccaaaa tgacattggg aatttcagaa atttgcattg gagtttcttt
1801 taagacatga gctactgtca ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaag
1861 aaaaaaaaaa aaaaa
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