LOCUS BC031002 1409 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit
D, mRNA (cDNA clone MGC:32729 IMAGE:3686772), complete cds.
ACCESSION BC031002
VERSION BC031002.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1409)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1409)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913437.
FEATURES Location/Qualifiers
source 1..1409
/db_xref="H-InvDB:HIT000041196"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32729 IMAGE:3686772"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1409
/gene="ATP6V1D"
/gene_synonym="VATD"
/gene_synonym="VMA8"
/db_xref="GeneID:51382"
/db_xref="HGNC:HGNC:13527"
/db_xref="MIM:609398"
CDS 101..844
/gene="ATP6V1D"
/gene_synonym="VATD"
/gene_synonym="VMA8"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 34kDa, V1
subunit D"
/protein_id="AAH31002.1"
/db_xref="GeneID:51382"
/db_xref="HGNC:HGNC:13527"
/db_xref="MIM:609398"
/translation="MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRF
RQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVHKAQVKIRAKKDNVA
GVTLPVFEHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDE
AIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEK
DLEQRRAAGEVLEPANLLAEEKDEDLLFE"
BASE COUNT 438 a 266 c 319 g 386 t
ORIGIN
1 agctgactcc cgtagaggaa gacactgtgg aggccagttc tggagctatt gcagcctcgg
61 ttgcccggcc ggggacccga gccgaaaagt tatcgtcaga atgtcgggca aagaccgaat
121 tgaaatcttt ccctcgcgaa tggcacagac catcatgaag gctcgtttaa agggagcaca
181 gacaggtcga aacctcctga agaaaaaatc tgatgcctta actcttcgat ttcgacagat
241 cctaaagaag ataatagaga ctaaaatgtt gatgggcgaa gtgatgagag aagctgcctt
301 ttcactagct gaagccaagt tcacagcagg tgacttcagc actacagtta tccaaaatgt
361 ccataaagcg caagtgaaga ttcgagcgaa gaaagataat gtagcaggtg ttactttgcc
421 agtatttgaa cattaccatg aaggaactga cagttatgaa ctgactggtt tagccagagg
481 tggggaacag ttggctaaat taaagaggaa ttatgccaaa gcagtggaac tactggtgga
541 actagcttct ctgcagactt cttttgttac tttggatgaa gctattaaga taaccaacag
601 gcgtgtaaat gccattgaac atgtcatcat tccccggatt gaacgtactc ttgcttatat
661 catcacagag ctggatgaga gagagcgaga agagttctat aggttaaaga aaatacaaga
721 gaagaaaaag attctaaagg aaaaatctga gaaggacttg gagcaaagga gagcagctgg
781 agaggtgttg gagcctgcta atcttctggc tgaagagaag gacgaggatc ttctatttga
841 ataatctttc ctgttctggt tctttgagaa accctaacac tggcttcatt ttaattcaca
901 gtgtgtaggt ttgatttgtg tggctattta ttttttggcc taagaatttc actggttgta
961 aaatttacct atgtctattt atgggattac ttttgcagaa tcataattta gcaaccattt
1021 atcatggatg aaagagatct gtaaaacctg cccaggaact tacagaattt actttgcaga
1081 agcgttatca tactccattt acatctgtgt tacacgtgat ctgcttacca agcatattag
1141 gaaatacctc ttaggaagca ttagcggtct caggccaatt actgtggagc agctttcatt
1201 cctacccact tgcaaacctt ggcgctgttg tctgagattg ctgcagccat tcttgttacc
1261 atggtacttc tcaaactttg tgaaaacctg cacttttcct tgcatgacag gttcctgtct
1321 tgtctgtcat gggagccatt ctgccaattt aaatgcgact gtggtataaa cagtaaaatg
1381 ataaaaaaaa aaaaaaaaaa aaaaaaaaa
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