LOCUS BC030986 1452 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nonhomologous end-joining factor 1, mRNA (cDNA clone
MGC:32656 IMAGE:4076851), complete cds.
ACCESSION BC030986
VERSION BC030986.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1452)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1452)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376141.
FEATURES Location/Qualifiers
source 1..1452
/db_xref="H-InvDB:HIT000041189"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32656 IMAGE:4076851"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1452
/gene="NHEJ1"
/gene_synonym="FLJ12610"
/gene_synonym="XLF"
/db_xref="GeneID:79840"
/db_xref="HGNC:HGNC:25737"
CDS 100..999
/gene="NHEJ1"
/gene_synonym="FLJ12610"
/gene_synonym="XLF"
/codon_start=1
/product="nonhomologous end-joining factor 1"
/protein_id="AAH30986.1"
/db_xref="GeneID:79840"
/db_xref="HGNC:HGNC:25737"
/translation="MEELEQGLLMQPWAWLQLAENSLLAKVFITKQGYALLVSDLQQV
WHEQVDTSVVSQRAKELNKRLTAPPAAFLCHLDNLLRPLLKDAAHPSEATFSCDCVAD
ALILRVRSELSGLPFYWNFHCMLASPSLVSQHLIRPLMGMSLALQCQVRELATLLHMK
DLEIQDYQESGATLIRDRLKTEPFEENSFLEQFMIEKLPEACSIGDGKPFVMNLQDLY
MAVTTQEVQVGQKHQGAGDPHTSNSASLQGIDSQCVNQPEQLVSSAPTLSAPEKESTG
TSGPLQRPQLSKVKRKKPRGLFS"
BASE COUNT 379 a 361 c 368 g 344 t
ORIGIN
1 ggggaaagcg gcctcttact ctaggccttt cggtttgcgc gagcgggcag gaaagcgtgc
61 gtgcggctaa gagagtgggc gctctcgcgg ccgctgacga tggaagaact ggagcaaggc
121 ctgttgatgc agccatgggc gtggctacag cttgcagaga actccctctt ggccaaggtt
181 tttatcacca agcagggcta tgccttgttg gtttcagatc ttcaacaggt gtggcatgaa
241 caggtggaca ctagtgtggt cagccagcga gccaaggagc tgaacaagcg gctcactgct
301 cctcctgcag ctttcctctg tcatttggat aatctccttc gcccattgtt gaaggacgct
361 gctcacccta gcgaagctac cttctcctgt gattgtgtgg cagatgcact gattctacgg
421 gtgcgaagtg agctctctgg cctccccttc tattggaatt tccactgcat gctagctagt
481 ccttccctgg tctcccaaca tttgattcgt cctctgatgg gcatgagtct ggcattacag
541 tgccaagtga gggagctagc aacgttactt catatgaaag acctagagat ccaagactac
601 caggagagtg gggctacgct gattcgagat cgattgaaga cagaaccatt tgaagaaaat
661 tccttcttgg aacaatttat gatagagaaa ctgccagagg catgcagcat tggtgatgga
721 aagccctttg tcatgaatct gcaggatctg tatatggcag tcaccacaca agaggtccaa
781 gtgggacaga agcatcaagg cgctggagat cctcatacct caaacagtgc ttccctgcaa
841 ggaatcgata gccaatgtgt aaaccagcca gaacaactgg tctcctcagc cccaaccctc
901 tcagcacctg agaaagagtc cacgggtact tcaggccctc tgcagagacc tcagctgtca
961 aaggtcaaga ggaagaagcc aaggggtctc ttcagttaat ctgttgtggc ctcagctgct
1021 gaggatggac ttggagaata gcttccaagc ttcaccttga aagaagctta catggcagca
1081 atatttctaa aatagtgata cagtcagagg cctcctgtaa gggcgagaga actgaagttg
1141 atgttgacag gcccacaggg aattggcctt ccctgttcaa gtggaagcca gtctctgaga
1201 atcccgtgct ctcctctctt ttggtggagg ttctgtaggt tcaggtttct accatggact
1261 ttaggtatat agggcaagtc agcaagaaag caccacacac tcaggaagcc ttgtctacct
1321 ttccctagcg tctctagcca gccagcccca gatactcctc agagacccac ttctctcttt
1381 tgcatggaat aaaaagcact cacagtccct gcttttggga tcaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aa
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