LOCUS BC030985 1136 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens malonyl CoA:ACP acyltransferase (mitochondrial), mRNA
(cDNA clone IMAGE:4774272), complete cds.
ACCESSION BC030985
VERSION BC030985.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1136)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1136)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: p Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51243058
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1136
/db_xref="H-InvDB:HIT000041188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4774272"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1136
/gene="MCAT"
/gene_synonym="fabD"
/gene_synonym="FASN2C"
/gene_synonym="MCT"
/gene_synonym="MGC47838"
/gene_synonym="MT"
/db_xref="GeneID:27349"
/db_xref="HGNC:HGNC:29622"
CDS 2..544
/gene="MCAT"
/gene_synonym="fabD"
/gene_synonym="FASN2C"
/gene_synonym="MCT"
/gene_synonym="MGC47838"
/gene_synonym="MT"
/codon_start=1
/product="malonyl CoA:ACP acyltransferase (mitochondrial)"
/protein_id="AAH30985.1"
/db_xref="GeneID:27349"
/db_xref="HGNC:HGNC:29622"
/translation="MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATG
AEEEAPWAATERRMPGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDL
LELSLHGPQETLDRTVHCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAAL
VFAGAMEFAEGSTVSPEEFL"
BASE COUNT 237 a 337 c 353 g 209 t
ORIGIN
1 catgagcgtc cgggtcgcac gggtagcgtg ggtcaggggc ttgggcgcca gctaccgccg
61 cggcgcctcg agcttcccgg tgcctccgcc gggcgcccag ggtgtagcgg agctgctgcg
121 agatgcgacc ggggcggagg aggaggcgcc ctgggcggcg acggagcggc gaatgccggg
181 ccagtgctcc gtgctgctct tcccgggcca gggcagccag gtggtgggca tgggccgcgg
241 tctgctcaac tacccgcgcg tccgcgaact ctacgccgcc gcccgccgcg tgctgggcta
301 cgacctgctg gaactgagcc tgcacgggcc gcaggagacc ctggaccgca ccgtgcactg
361 tcagcccgcg atcttcgtgg catcgctggc cgctgtcgag aaactacatc acctgcagcc
421 ctcggtgatt gagaactgtg ttgctgctgc tggattcagt gtgggagagt ttgcagccct
481 agtgtttgcc ggagccatgg aatttgctga aggctctacg gtttctccag aagaattcct
541 ctaagtttca tttcagacgc accaggatgt tgccggttag tggcgcattc cacacccgcc
601 tcatggagcc agccgtggag cccctgacgc aagctttaaa ggcagtcgac attaagaagc
661 ctctggtttc tgtctactcc aacgtccacg ggcatagata caggcatccc gggcacatcc
721 acaagctgct ggcccagcag ctggtctccc cagtgaagtg ggagcagacg atgcatgcca
781 tatacgaaag gaaaaagggc agggggttcc cccaaacttt cgaagtaggc cctggcaggc
841 agctgggagc catcctgaag agctgtaaca tgcaggcctg gaagtcctac agcgccgtgg
901 atgtgctgca gaccctcgaa catgtggacc tggaccctca ggagcccccg agatgactgc
961 agggggctca aatgcaatga ccccctctgt cctcctgagg agaggctgta ggctgtgcct
1021 gtcgccccct accttcctaa tggctcctcc tctgaggagt gaaagggatt tgtttgcaac
1081 gtgctttgaa ggccacataa aaagcccaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//