LOCUS BC030970 1784 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens DEP domain containing 7, mRNA (cDNA clone MGC:32600
IMAGE:4133262), complete cds.
ACCESSION BC030970
VERSION BC030970.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1784)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1784)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: b Column: 6.
FEATURES Location/Qualifiers
source 1..1784
/db_xref="H-InvDB:HIT000041181"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32600 IMAGE:4133262"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1784
/gene="DEPDC7"
/gene_synonym="dJ85M6.4"
/db_xref="GeneID:91614"
/db_xref="HGNC:HGNC:29899"
CDS 93..1628
/gene="DEPDC7"
/gene_synonym="dJ85M6.4"
/codon_start=1
/product="DEP domain containing 7"
/protein_id="AAH30970.1"
/db_xref="GeneID:91614"
/db_xref="HGNC:HGNC:29899"
/translation="MATVQEKAAALNLSALHSPAHRPPGFSVAQKPFGATYVWSSIIN
TLQTQVEVKKRRHRLKRHNDCFVGSEAVDVIFSHLIQNKYFGDVDIPRAKVVRVCQAL
MDYKVFEAVPTKVFGKDKKPTFEDSSCSLYRFTTIPNQDSQLGKENKLYSPARYADAL
FKSSDIRSASLEDLWENLSLKPANSPHVNISATLSPQVINEVWQEETIGRLLQLVDLP
LLDSLLKQQEAVPKIPQPKRQSTMVNSSNYLDRGILKAYSDSQEDEWLSAAIDCLEYL
PDQMVVEISRSFPEQPDRTDLVKELLFDAIGRYYSSREPLLNHLSDVHNGIAELLVNG
KTEIALEATQLLLKLLDFQNREEFRRLLYFMAVAANPSEFKLQKESDNRMVVKRIFSK
AIVDNKNLSKGKTDLLVLFLMDHQKDVFKIPGTLHKIVSVKLMAIQNGRDPNRDAGYI
YCQRIDQRDYSNNIEKTTKDELLNLLKTLDEDSKLSAKEKKKLLGQFYKCHPDIFIEH
FGD"
BASE COUNT 602 a 338 c 371 g 473 t
ORIGIN
1 gagccacgcc ccgcacagtt aacagacggg cgctcaggga gctagggagc tgtgaatctg
61 ctggaggagt tggcgtccgg ggagcaaggg ccatggccac cgtgcaggag aaggctgctg
121 cgctgaacct ctcggctctc cacagccccg cgcacaggcc tccgggtttc agtgtagctc
181 agaagccatt tggagccacg tatgtatgga gcagcatcat aaacactctt caaacacaag
241 tggaagtgaa aaaacgaagg caccgtttaa aacgacataa tgactgcttt gttggttcag
301 aagctgtgga tgtcattttt tctcacctaa ttcagaataa gtattttggt gatgtagata
361 ttcctcgagc caaagtggtg agagtgtgtc aagcgcttat ggactacaaa gtatttgaag
421 cagttccaac caaagtcttt ggaaaagaca aaaaacctac atttgaagat agtagttgca
481 gcctttatag attcaccaca atacctaacc aagacagtca gttaggcaaa gagaacaaac
541 tatattcacc tgccaggtat gcagatgcat tatttaagtc atccgatatc agatcagcca
601 gtttagagga cctgtgggaa aatctgagtt taaagccagc caactcccct catgtaaata
661 tctctgcaac cttgtctcca caagttatta atgaagtgtg gcaagaagaa acaattgggc
721 gtctactaca acttgtagac cttccacttc ttgactcctt actgaaacag caagaggctg
781 tacctaaaat tcctcaacct aagaggcagt ccaccatggt caacagcagt aactatctgg
841 atcgagggat tctcaaggct tatagtgact ctcaggaaga tgagtggctc tcggcagcaa
901 ttgactgttt agaatacctt ccagaccaaa tggtggtgga aataagcaga agctttcctg
961 agcaaccaga ccgaacagac ttagtgaaag aacttctgtt tgatgccatt ggcagatatt
1021 acagtagtag ggaacctctg ttaaatcact tatctgacgt tcataatgga attgcagaac
1081 tcttagtgaa tgggaagacg gaaatagctt tagaagctac ccagctcctt ctaaagcttt
1141 tagatttcca aaatagagaa gaatttagaa gactactgta tttcatggct gttgcagcaa
1201 atccttctga gtttaaatta cagaaagaaa gtgacaaccg aatggttgtg aaaaggatat
1261 tctcaaaagc tattgttgac aataaaaatt tatccaaagg caaaacagat cttctggtac
1321 tctttttaat ggatcatcag aaagatgttt ttaagattcc tggaactcta cataaaattg
1381 taagtgttaa gcttatggcc atacagaacg gaagagatcc aaatagagat gcaggatata
1441 tttattgcca gagaattgat caacgtgact attccaacaa tatagagaag acaaccaaag
1501 atgagctgtt gaatttacta aaaactcttg atgaggattc aaaactttct gccaaagaga
1561 agaaaaaatt gctaggtcaa ttctataagt gtcacccaga catctttatt gagcattttg
1621 gagactgagt ttttaatatc tgtatataag ttgtgtattt taagaataaa ttatgtatcc
1681 taaatatcca atcacatttg taagcgtgga agctctaaat ttgaaactgt acttaataaa
1741 aatttttttg tattaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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