LOCUS BC030827 4277 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens hippocalcin like 4, mRNA (cDNA clone MGC:26229 IMAGE:4811834), complete cds. ACCESSION BC030827 VERSION BC030827.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4277) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4277) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: j Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19913444. FEATURES Location/Qualifiers source 1..4277 /db_xref="H-InvDB:HIT000041160" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26229 IMAGE:4811834" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4277 /gene="HPCAL4" /gene_synonym="DKFZp761G122" /gene_synonym="HLP4" /db_xref="GeneID:51440" /db_xref="HGNC:HGNC:18212" CDS 118..693 /gene="HPCAL4" /gene_synonym="DKFZp761G122" /gene_synonym="HLP4" /codon_start=1 /product="hippocalcin like 4" /protein_id="AAH30827.1" /db_xref="GeneID:51440" /db_xref="HGNC:HGNC:18212" /translation="MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILN LEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLN WAFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQ DKDDQITLEEFKEAAKSDASIVLLLQCDMQK" BASE COUNT 1108 a 1051 c 1025 g 1093 t ORIGIN 1 gactccggcg cagaccttgg agagcacagc tgccggcccg cgagccagcc tcggttcccg 61 cggcccgccg aggctcggag ccatccagcg acccggcgac cggcctcagg ccccgccatg 121 gggaagacca acagcaagct ggcccccgag gtgctggagg accttgttca gaacactgag 181 ttcagcgagc aggagctgaa gcagtggtac aagggcttcc tgaaggactg ccccagcggc 241 atcctcaacc tggaggagtt tcagcagctc tacatcaagt tcttccccta cggcgacgcc 301 tccaagttcg cgcagcacgc tttccgcacc ttcgacaaga acggcgacgg caccatcgac 361 ttccgggagt tcatctgcgc cctgtcggtc acctcccgcg gcagcttcga gcagaagctc 421 aactgggcct ttgagatgta cgacctggac ggcgacgggc gcatcacgcg cctggagatg 481 ctggagatca tcgaggcaat ctacaagatg gtgggcaccg tgatcatgat gcgcatgaac 541 caggacgggc tcacgcccca gcagcgtgtg gacaagatct tcaagaagat ggaccaggat 601 aaggacgacc agattacatt ggaggagttc aaggaggcag ccaagagtga cgcatccatt 661 gtgttgctgc tgcagtgtga catgcagaag tagaagctgg tgaggggcag ggtccctggc 721 cagaaggggc atggccacct cccaacctga tgacctctct ggctggcctc ccaggaggag 781 ggacactcca gccccccctc tctggcccac ccagtcctct gcccaagccc ttcctcccct 841 ccatcaagat ctttgaggga ccacctcacc ctgcaaaaga gacaggtcct ccagtaccct 901 gtcttctagc cccacctccc acttggccag aaccaatgtc cattgggcat aggtgagttg 961 gctttttccc caggaggtga ggttaaggag ttgggggcct ggggttctgg ttaggaattc 1021 tcttgatcct gggattatgc tttataggat gtggtcccac aggcctgtca cagggccaaa 1081 ttgggtctgt ccattcctga ggctccagat cccataaagg gggtctcttc cccatccctt 1141 ctactctacc tggcccttcc agccccagca tttggagcgt tcattcagtc ctttcttcag 1201 ctaatgatta ctgagcacct gtttggtgct aaggatatgg tcatttacaa gacacatctt 1261 gtgccctctg gaagctcata gggttgtgag gcaaacttcc agccgtcagg gtctcagcta 1321 agcagaaggt gctggaaggc tggttagtct gggaggagct atttcatctt ccagctcagc 1381 tccacacaaa gctgcagaag gacgaaatga aaagcatttg gaagtttagg agccacgtga 1441 gtgaaagttt taagaaaaat gaaatttatg tcatacttat ttttttagta ccctttaaag 1501 gagctacagt cattttatta tttcaggagg ttaaaatata ctctatatta cttggtttct 1561 tataaaatga ttaaatgaat agagaaaata ttaattttca aggggaaaaa acctgagaag 1621 aaagggagaa aagaccatga aatttaccag ataacacttt ttaagactaa gtcctgagct 1681 gccactctca gcagtttttg ctgcttcagc ttttcctttt tattaccttt ttcaattcaa 1741 caagcaactt tctgctacat acttactccg gttgggtgct gacttcaggg acaggaaaaa 1801 gcaaggtttg caaagagtga aactagtgta tattccgtat cttggtagtt cgtttctgga 1861 ttgggtttag tttcagaact ggacttgttc cttcactgcc acagaatcag aaagagctag 1921 aagaaaaggc tcacctggcc actgtttagg cacccagaca taatttatgg acgaaatgcc 1981 taaaaatgtg ccaggcatgc tctgtttgag aggctttttc taaccccaaa tcttagatct 2041 gccaggtagt tcaacatctt ccaagtgtgc tggttctgct ttccaatgcc tgcttcccaa 2101 ttttggatcc atgagctata cagctgcatg ctttgactgc cggaaaaatt aatcttgctt 2161 cttcatcagg tctttctcct gtacttgtga tcagaaatta cctttgacgt gcagtgacag 2221 ttgatttcct cttgaactgc cggtgaaaac agtctagtac acaggtgctg tcagcccagg 2281 gtgggagcag gaaatgattg ctgagcccgg ggcaggggaa ttgcatctgc aggaaagaga 2341 tgcagcatgc tcctcactcc tgagtgccca cctgtcctgc ttctctgcag gtgaaaactc 2401 tgggggatgc tgatcaatag agcttggtcc caagctctac tgggcgcttg gaggtagcaa 2461 ggccactggg ttgctatcct cttgctgggg atagcaacca ctggtttgca accactgggt 2521 tgctatcctt ttgctatcct cttgctcatg accagccata tggtgaggct ggggagttca 2581 catcctcagg caggaactag cagttgttta tccagcaatg cctcaaggat gttgcattgc 2641 tcccaggaac tggctattag gtatgtcttg tgcggtcagt cagcatcaca gacacataga 2701 tgctcaccag cctggcttag ctgggaccta aatcttctgg tgaaaagctt ttcactaagt 2761 gaggttcctt ccctgcaaat gctgaatcta gcctaattcg caaccacaca gaatttcatg 2821 gctttcaaag gcttgccatg tgccccatct cattctatac tcacatccca tggaggtgag 2881 gattttcact tcttttctct agacttggaa gctgagattc agagaggaag catcccttgt 2941 gcaagatcac atagtcagga ggtgacacag ggctaagact tgaaccaagg ctctaagagg 3001 atttcttctt ttcagagtct cttccctgtc catttctgtg actaagctgt gcagaggttg 3061 acagcagggc aagttacatt gatattcatc ctttataggc ttcctgctaa aaagcttctg 3121 agattgtggt cttccaaaaa aaataggagc ttggttgaag tccccacatt ttcaagcact 3181 cagtgttctg cctctggcag ctgtgctaac agctcagtgc tgtcctggga gtcctctgac 3241 tcagaaccct cgaagcatcc tgcattgtct ttacccacca tcatcttcac taagagaaac 3301 atgcctaccc atgaaggcgt gtttgattac tccaggcttc tggacacaca tacccatggg 3361 tgatttttgc tcctcaggcc caatattctc agacagcaca gcagtgtgaa cacacaatgc 3421 caggccagga actgggacca ccatcttgct gatggaagga acaacaggtg gcccaggaca 3481 tgctcctgca tactcctggg tgtcccaggg actgtgtgct caggagcact gtggtagagc 3541 actggccctg ccttgagaag agacacaggt ctcccgtccc tgcaccagct gagagagact 3601 tgccgcaaag cacaaggctg gcagagattt atgtatgact tgcacagaca caaaaatata 3661 cagacaatca aaacattgat atattcaaac tctcctttaa attccaatct tattgcaaca 3721 actctgtgaa ttgcaaggtc ccagaatctg ccttctcaca tactctaccc tcattcatcc 3781 ttttgggcta attgatgagc atcttatttc ttatctctaa aaattatcag caaaggctac 3841 ttcagatggc cactttagtc ctttcagctg tagtcaggat tatttaactt acctgtatat 3901 caaaagtgaa gaaaaagtta gttcataagt aaaggcacta aatcctttcc tgacaatggc 3961 agagtctcta gaggtagaaa tttgccttgc tgcagagaga gaaggaatgg cgtgggatgg 4021 gggaaagaaa agaaagagaa gaagctgggg tctccaggca gggtagtaag ctgacactaa 4081 atatttttta cacaaaaatg tattgaagca acaaatattt cctgaagatc caccctgggt 4141 gaggctttga gctgacttta gagatcactg tggggtcaag aatgtcttac atgttttatt 4201 catcattctt gaaaaaagaa ataattcaaa ccttggaatt aaaaagtcag aaaaatatgg 4261 gaaaaaaaaa aaaaaaa //