LOCUS BC030779 3404 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens myotubularin 1, mRNA (cDNA clone MGC:26338
IMAGE:4824189), complete cds.
ACCESSION BC030779
VERSION BC030779.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3404)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3404)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557895.
FEATURES Location/Qualifiers
source 1..3404
/db_xref="H-InvDB:HIT000041128"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26338 IMAGE:4824189"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3404
/gene="MTM1"
/gene_synonym="CNM"
/gene_synonym="MTMX"
/gene_synonym="XLMTM"
/db_xref="GeneID:4534"
/db_xref="HGNC:HGNC:7448"
/db_xref="MIM:300415"
CDS 36..1847
/gene="MTM1"
/gene_synonym="CNM"
/gene_synonym="MTMX"
/gene_synonym="XLMTM"
/codon_start=1
/product="myotubularin 1"
/protein_id="AAH30779.1"
/db_xref="GeneID:4534"
/db_xref="HGNC:HGNC:7448"
/db_xref="MIM:300415"
/translation="MASASTSKYNSHSLENESIKRTSRDGVNRDLTEAVPRLPGETLI
TDKEVIYICPFNGPIKGRVYITNYRLYLRSLETDSSLILDVPLGVISRIEKMGGATSR
GENSYGLDITCKDMRNLRFALKQEGHSRRDMFEILTRYAFPLAHSLPLFAFLNEEKFN
VDGWTVYNPVEEYRRQGLPNHHWRITFINKCYELCDTYPALLVVPYRASDDDLRRVAT
FRSRNRIPVLSWIHPENKTVIVRCSQPLVGMSGKRNKDDEKYLDVIRETNKQISKLTI
YDARPSVNAVANKATGGGYESDDAYHNAELFFLDIHNIHVMRESLKKVKDIVYPNVEE
SHWLSSLESTHWLEHIKLVLTGAIQVADKVSSGKSSVLVHCSDGWDRTAQLTSLAMLM
LDSFYRSIEGFEILVQKKWISFGHKFASRIGHGDKNHTDADRSPIFLQFIDCVWQMSK
QFPTAFEFNEQFLIIILDHLYSCRFGTFLFNCESARERQKVTERTVSLWSLINSNKEK
FKNPFYTKEINRVLYPVASMRHLELWVNYYIRWNPRIKQQQPNPVEQRYMELLALRDE
YIKRLEELQLANSAKLSDPPTSPSSPSQMMPHVQTHF"
BASE COUNT 1069 a 598 c 690 g 1047 t
ORIGIN
1 agcggggtgg cgcccggagc ccgagagttt ccaggatggc ttctgcatca acttctaaat
61 ataattcaca ctccttggag aatgagtcta ttaagaggac gtctcgagat ggagtcaatc
121 gagatctcac tgaggctgtt cctcgacttc caggagaaac actaatcact gacaaagaag
181 ttatttacat atgtcctttc aatggcccca ttaagggaag agtttacatc acaaattatc
241 gtctttattt aagaagtttg gaaacggatt cttctctaat acttgatgtt cctctgggtg
301 tgatctcgag aattgaaaaa atgggaggcg cgacaagtag aggagaaaat tcctatggtc
361 tagatattac ttgtaaagac atgagaaacc tgaggttcgc tttgaaacag gaaggccaca
421 gcagaagaga tatgtttgag atcctcacga gatacgcgtt tcccctggct cacagtctgc
481 cattatttgc atttttaaat gaagaaaagt ttaacgtgga tggatggaca gtttacaatc
541 cagtggaaga atacaggagg cagggcttgc ccaatcacca ttggagaata acttttatta
601 ataagtgcta tgagctctgt gacacttacc ctgctctttt ggtggttccg tatcgtgcct
661 cagatgatga cctccggaga gttgcaactt ttaggtcccg aaatcgaatt ccagtgctgt
721 catggattca tccagaaaat aagacggtca ttgtgcgttg cagtcagcct cttgtcggta
781 tgagtgggaa acgaaataaa gatgatgaga aatatctcga tgttatcagg gagactaata
841 aacaaatttc taaactcacc atttatgatg caagacccag cgtaaatgca gtggccaaca
901 aggcaacagg aggaggatat gaaagtgatg atgcatatca taacgccgaa cttttcttct
961 tagacattca taatattcat gttatgcggg aatctttaaa aaaagtgaag gacattgttt
1021 atcctaatgt agaagaatct cattggttgt ccagtttgga gtctactcat tggttagaac
1081 atatcaagct cgttttgaca ggagccattc aagtagcaga caaagtttct tcagggaaga
1141 gttcagtgct tgtgcattgc agtgacggat gggacaggac tgctcagctg acatccttgg
1201 ccatgctgat gttggatagc ttctatagga gcattgaagg gttcgaaata ctggtacaaa
1261 aaaaatggat aagttttgga cataaatttg catctcgaat aggtcatggt gataaaaacc
1321 acaccgatgc tgaccgttct cctatttttc tccagtttat tgattgtgtg tggcaaatgt
1381 caaaacagtt ccctacagct tttgaattca atgaacaatt tttgattata attttggatc
1441 atctgtatag ttgccgattt ggtactttct tattcaactg tgaatctgct cgagaaagac
1501 agaaggttac agaaaggact gtttctttat ggtcactgat aaacagtaat aaagaaaaat
1561 tcaaaaaccc cttctatact aaagaaatca atcgagtttt atatccagtt gccagtatgc
1621 gtcacttgga actctgggtg aattactaca ttagatggaa ccccaggatc aagcaacaac
1681 agccgaatcc agtggagcag cgttacatgg agctcttagc cttacgcgac gaatacataa
1741 agcggcttga ggaactgcag ctcgccaact ctgccaagct ttctgatccc ccaacttcac
1801 cttccagtcc ttcgcaaatg atgccccatg tgcaaactca cttctgaggg gggaccctgg
1861 caccgcatta gagctcgaaa taaaggcgat agctgacttt catttggggc atttgtaaaa
1921 agtagattaa aatatttgcc tccatgtaga acttgaacta acataatctt aaactcttga
1981 atatgtgcct tctagaatac atattacaag aaaactacag ggtccacacg gcaatcagaa
2041 gaaaggagct gagatgaggt tttggaaaac cctgacacct ttaaaaagca gtttttgaaa
2101 gacaaaattt agatttaatt tacgtcttga gaaatactat atatacaata tatattttgt
2161 gggcttaatt gaaacaacat tattttaaaa tcaaagggga tatatgtttg tggaatggat
2221 tttcctgaag ctgcttaaca gttgctttgg attctctaag atgaatccaa atgtgaaaga
2281 tgcatgttac tgccaaaacc aaattgagct cagcttccta ggcattaccc aaaagcaagg
2341 tgtttaagta attgccagct tttataccat catgagtggt gacttaagga gaaatagctg
2401 tatagatgag tttttcatta tttggaaatt taggggtaga aaatgttttc ccctaatttt
2461 ccagagaagc ctatttttat atttttaaaa aactgacagg gcccagttaa atatgatttg
2521 cattttttaa atttgccagt tttattttct aaattctttc atgagcttgc ctaaaattcg
2581 gaatggtttt cgggttgtgg caaaccccaa agagagcact gtccaaggat gtcgggagca
2641 tcctgctgct taggggaatg ttttcgcaaa tgttgctcta gtcagtccag ctcatctgcc
2701 aaaatgtagg gctaccgtct tggatgcatg agctattgct agagcatcat ccttagaaat
2761 cagtgcccca gatgtacatg tgttgagcgt attcttgaaa gtattgtgtt tatgcatttc
2821 aatttcaatg gtgttggctt cccctcccca ccccacgcgt gcataaaaac tggttctaca
2881 aattttttac ttgaagtacc aggccgtttg ctttttcagg ttgttttgtt ttatagtatt
2941 aagtgaaatt ttaaatgcac agttctattt gctatctgaa ctaattcatt tattaagtat
3001 atttgtaaaa gctaaggctc gagttaaaac aatgaagtgt tttacaatga tttgtaaagg
3061 actatttata actaatatgg ttttgttttc aatgaattaa gaaagattaa atatatcttt
3121 gtaaattatt ttatgtcata gtttaattgg tctaccaagt aagacatctc aaatacagta
3181 gtataatgta tgaattttgt aagtataaga aattttatta gacattctct tactttttgt
3241 aaatgctgta aatatttcat aaattaacaa agtgtcactc cataaaaaga aagctaatac
3301 taatagccta aaagattttg tgaaatttca tgaaaacttt ttaatggcaa taatgactaa
3361 agacctgctg taataaatgt attaactgaa aaaaaaaaaa aaaa
//