LOCUS BC030706 4342 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens protein kinase D3, mRNA (cDNA clone MGC:33062 IMAGE:5266769), complete cds. ACCESSION BC030706 VERSION BC030706.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4342) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4342) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC030706.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: k Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48255886. FEATURES Location/Qualifiers source 1..4342 /db_xref="H-InvDB:HIT000051001" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33062 IMAGE:5266769" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4342 /gene="PRKD3" /gene_synonym="EPK2" /gene_synonym="nPKC-NU" /gene_synonym="PKC-NU" /gene_synonym="PKD3" /db_xref="GeneID:23683" /db_xref="MIM:607077" CDS 501..2336 /gene="PRKD3" /gene_synonym="EPK2" /gene_synonym="nPKC-NU" /gene_synonym="PKC-NU" /gene_synonym="PKD3" /codon_start=1 /product="PRKD3 protein" /protein_id="AAH30706.1" /db_xref="GeneID:23683" /db_xref="MIM:607077" /translation="MSANNSPPSAQKSVLPTAIPAVLPAASPCSSPKTGLSARLSNGS FSAPSLTNSRGSVHTVSFLLQIGLTRESVTIEAQELSLSAVKDLVCSIVYQKFPECGF FGMYDKILLFRHDMNSENILQLITSTDEIHEGDLVEVVLSALATVEDFQIRPHTLYVH SYKAPTFCDYCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRRLSNVSLP GPGLSVPRPLQPEYVALPSEESHVHQEPSKRIPSWSGRPIWMEKMVMCRVKVPHTFAV HSYTRPTICQYCKRLLKGLFRQGMQCKDCKFNCHKRCASKVPRDCLGEVTFNGEPSSL GTDTDIPMDIDNNDINSDSSRGLDDTEEPSPPEDKMFFLDPSDLDVERDEEAVKTISP STSNNIPLMRVVQSIKHTKRKSSTMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQN ESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNP VLAATGVGLDVAQSWEKAIRQALMPVTPQASVCTSPGRGKDHKDLSTSISVSNCQIQE NVDISTVYQIFADEVLGSGQFGIVYGGKQLQPFAYCTHYFKNWKM" BASE COUNT 1333 a 862 c 816 g 1331 t ORIGIN 1 gggacatttg agaaggtgtc ctatcaaatt agtaaaccaa aggaaaagta ctgaatagat 61 taatccaaaa cacttactgt tttttaaacg aagaggattt caccttgaca gaaaaacaac 121 ttttattcaa tatgtatttc ctgaaattaa agagacaagt acagactgaa aggaaaatag 181 attcgtaaat aagctacgtc aactctatcc tgctgaggat agctcagtga tgttaaatcc 241 tttacaaatc cctggttgtc ttcctacaga caagactgct ttttgatggg actgatatta 301 agagaaatag gacctttggg gcattcaact ccttgataaa acttaaaagt atcggcatga 361 gtggcttaac agaggaaata aagaagtttt caactaaatc caaaagtgcg gtcattttct 421 ttactgctgt tattttaaaa acctcttcat aaccattgaa aaagaatcga caactatttt 481 aaaagattaa agaaaggcag atgtctgcaa ataattcccc tccatcagcc cagaagtctg 541 tattacccac agctattcct gctgtgcttc cagctgcttc tccgtgttca agtcctaaga 601 cgggactctc tgcccgactc tctaatggaa gcttcagtgc accatcactc accaactcca 661 gaggctcagt gcatacagtt tcatttctac tgcaaattgg cctcacacgg gagagtgtta 721 ccattgaagc ccaggaactg tctttatctg ctgtcaagga tcttgtgtgc tccatagttt 781 atcaaaagtt tccagagtgt ggattctttg gcatgtatga caaaattctt ctctttcgcc 841 atgacatgaa ctcagaaaac attttgcagc tgattacctc aacagatgaa atacatgaag 901 gagacctagt ggaagtggtt ctttcagctt tagccacagt agaagacttc cagattcgtc 961 cacatactct ctatgtacat tcttacaaag ctcctacttt ctgtgattac tgtggtgaga 1021 tgctctgggg attggtacgt caaggactga aatgtgaagg ctgtggatta aattaccata 1081 aacgatgtgc cttcaagatt ccaaataact gtagtggagt aagaaagaga cgtctgtcaa 1141 atgtatcttt accaggaccc ggcctctcag ttccaagacc cctacagcct gaatatgtag 1201 cccttcccag tgaagagtca catgtccacc aggaaccaag taagagaatt ccttcttgga 1261 gtggtcgccc aatctggatg gaaaagatgg taatgtgcag agtgaaagtt ccacacacat 1321 ttgctgttca ctcttacacc cgtcccacga tatgtcagta ctgcaagcgg ttactgaaag 1381 gcctctttcg ccaaggaatg cagtgtaaag attgcaaatt caactgccat aaacgctgtg 1441 catcaaaagt accaagagac tgccttggag aggttacttt caatggagaa ccttccagtc 1501 tgggaacaga tacagatata ccaatggata ttgacaataa tgacataaat agtgatagta 1561 gtcggggttt ggatgacaca gaagagccat cacccccaga agataagatg ttcttcttgg 1621 atccatctga tctcgatgtg gaaagagatg aagaagccgt taaaacaatc agtccatcaa 1681 caagcaataa tattccgcta atgagggttg tacaatccat caagcacaca aagaggaaga 1741 gcagcacaat ggtgaaggaa gggtggatgg tccattacac cagcagggat aacctgagaa 1801 agaggcatta ttggagactt gacagcaaat gtctaacatt atttcagaat gaatctggat 1861 caaagtatta taaggaaatt ccactttcag aaattctccg catatcttca ccacgagatt 1921 tcacaaacat ttcacaaggc agcaatccac actgttttga aatcattact gatactatgg 1981 tatacttcgt tggtgagaac aatggggaca gctctcataa tcctgttctt gctgccactg 2041 gagttggact tgatgtagca cagagctggg aaaaagcaat tcgccaagcc ctcatgcctg 2101 ttactcctca agcaagtgtt tgcacttctc cagggcgagg gaaagatcac aaagatttgt 2161 ctacaagtat ctctgtatct aattgtcaga ttcaggagaa tgtggatatc agtactgttt 2221 accagatctt tgcagatgag gtgcttggtt caggccagtt tggcatcgtt tatggaggta 2281 agcaactaca gccgtttgca tattgtacac attattttaa aaactggaaa atgtaaaaca 2341 tctgccagct gttttgtcat ctcatagttt tgtccagtgc ctttttttta aaggctgact 2401 tgttatcttt cagctaaatc cttctcactg taatttgagt attcttccct taatgtcatt 2461 gcaaacttta aaaattaaca gaatcagaaa attttacagt gtgttttatc tcttcttgta 2521 gctcacacat acagatgttt gtcggaggca gggggggaga tggtttgaag tttatgttgg 2581 gctgagtggg cttattcatt gaagtatatt ccctactagt tttccaacac aaatggcacc 2641 atttgtctac tgttggcatg attgttctat taagtctgaa aacctgaacc tgaaatccaa 2701 ctttgcgatt taggatattg atgaagtcat ttaaccttac tgtgcgttag catcttcaac 2761 tgtttaatgg aactaataaa acctgacctg tgtagctcat agggcttaaa tattaattaa 2821 acttaatata tgtaaaggta ctaagaaaga aatgttaaac ccttgttatc ccttgctaag 2881 acttggtaca gtagtttcct agttggctgt tctgcctcca ttcttacctt cttttcatac 2941 aactcttaga gtcaatcttt cagaaaattc acatctgata ttagtattac ctcacataga 3001 acccttaagt ggttcacagt catctacaga ttcatagcca gttttcttag cagaggattt 3061 caaggctgct gtaatttatc cctgcttctc tagcctcaga tctaattgca gcttcctctt 3121 tgctttctat ctttcagtcc tgtttacatg cctccatacc ctttgcctct ctgctccttc 3181 tccatccctt tgtctcttct agtgcacatt ttttcatact tcagggctca actaaagggc 3241 tttctctgtg gaaatttctt gtccccgtac ctatttctcc atcaaataaa aacatggttc 3301 ccctttggta ctcctgctac ccaacatact tctctcacaa tatctattac cctttgggtt 3361 tacattattg tcttcccact gaactttatt ggagcgttgg ctgtgagatg tctggatctt 3421 ctttgtattc ctagcaccta gtattgtgac ataaagcagt cgcctagaaa atgtgttgac 3481 tctgcatgca tatataatat ctatggtttg caacttcaga tttgtcagtt ttaagagtag 3541 ttacatctct ggaggacttc ctgtcatcag aggaacaaag aactgtccga ggtacctttg 3601 gcttcttacc aaaaatgcac acatttgttc agtcttttca agtagactta cgattgtgcc 3661 attgagacaa atgagttaat ctaaaataaa tagctatgta gagaagagca agtcagatac 3721 atatttgaag aacaaatacc aaaaatatac ctgtcatttt cactgcttaa tctgtagcat 3781 ctaaaggcat acctagtaca taataggtat aactagttaa tttgaattaa taaatgaggg 3841 aatgactgtt cattataata aacttctacc tttttttaat atctagattc tagaatatag 3901 agacaaatat aaatttttta tatctagatt ctagaatata gagacaccca gagtttgtgg 3961 gtacatggtt aaatcactct gtgctgactc attgaatcta gaataaaatt gattcattca 4021 tacagtattt ccatcttgac agagtctctg aaggactagg tcagggtaat taactatcat 4081 tgatttaaca aggtagatta cttttcagca acaagttcat tcaaattttc tcctgtttag 4141 ataatgcagc tgactttatt aggggcaaat attatgtatg gaggggaaaa caattttttc 4201 ctaaattaaa ggtgagtgaa ggagtgtgga gaaagaacaa aaatgagcca aaaagaaaat 4261 tcaagagtaa atacatataa atttcagtct gtggacaact ccctaataaa gctgtcagtt 4321 tgctccaaaa aaaaaaaaaa aa //