LOCUS BC030700 3042 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger protein 680, mRNA (cDNA clone MGC:26916
IMAGE:4837196), complete cds.
ACCESSION BC030700
VERSION BC030700.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: l Column: 13.
FEATURES Location/Qualifiers
source 1..3042
/db_xref="H-InvDB:HIT000041109"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26916 IMAGE:4837196"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3042
/gene="ZNF680"
/gene_synonym="FLJ90430"
/db_xref="GeneID:340252"
/db_xref="HGNC:HGNC:26897"
CDS 158..1750
/gene="ZNF680"
/gene_synonym="FLJ90430"
/codon_start=1
/product="zinc finger protein 680"
/protein_id="AAH30700.1"
/db_xref="GeneID:340252"
/db_xref="HGNC:HGNC:26897"
/translation="MPGPPGSLEMGPLTFRDVAIEFSLEEWQCLDTAQRNLYRKVMFE
NYRNLVFLGIAVSKPHLITCLEQGKEPWNRKRQEMVAKPPVIYSHFTEDLWPEHSIKD
SFQKVILRGYGKCGHENLQLRISCKSVDESKVFKEGYNELNQCLRTTQSKIFQCDKYV
KVFHKFSNSNSHKKRNTGKKVFKCKECGKSFCMLSHLTQHIRIHTRENSYKCEECGKV
LNWFSELIKHKGIHMGEKPYKCEECGKAFNQSSTLIKHKKIHIEEKPFKCEECGKAFS
LFSILSKHKIIHTGDKPYKCDECHKAFNWFATLTNHKRIHTGEKPFKCEECGKGFNQF
SNLTKHKKIHTGEKPYKCEECGKAFNQFANLTRHKKIHTGEKSYKCEECGKAFIQSSN
LTEHMRIHTGEKPYKCEECGKAFNGCSSLTRHKRIHTRENTYKCEECGKGFTLFSTLT
NHKVIHTGEKSYKCDECGNVFNWPATLANHKRIHAREKPYKCEECGKAFNRSSHLTRH
KKIHTGEKLYKPEKCDDNFDNT"
BASE COUNT 1111 a 466 c 561 g 904 t
ORIGIN
1 agcggggacg ggacggcttc cgggatttgg cggggccttt gtctctagct gctgcgggag
61 ctccaggtct agtctttact gctctgtgta ttctgctcct agaggcccag cctctgtgac
121 tccgttatct gcaggtattg ggagatgcac agctaagatg ccaggaccac ctggaagcct
181 agaaatggga ccactgacat ttagggatgt ggccatagaa ttctctctgg aggagtggca
241 atgcctggac actgcacaac ggaatttata taggaaagtg atgtttgaga actacagaaa
301 cctggtcttc ctgggtattg ctgtctctaa gcctcacctg ataacctgtt tggagcaagg
361 aaaagagccc tggaatagga agagacagga gatggtagcc aaacccccag ttatatattc
421 tcatttcact gaagaccttt ggccagagca tagcataaaa gattcttttc aaaaagtgat
481 actgagagga tatggaaaat gtggacatga gaatttacaa ttaagaataa gttgtaaaag
541 tgtggatgag tctaaggtgt tcaaagaagg ttataatgaa cttaaccaat gtttgagaac
601 tacccagagc aaaatatttc aatgtgataa atacgtgaaa gtctttcata aattttcaaa
661 ttcaaacagt cataagaaaa gaaatactgg aaagaaggtt ttcaaatgta aagaatgtgg
721 caaatcattt tgcatgcttt cacatctaac acaacatata agaattcaca ctagagagaa
781 ttcttacaaa tgtgaggaat gtggcaaagt tcttaactgg ttctcagagc ttattaaaca
841 taagggaatt catatgggag agaaacccta caaatgtgag gaatgtggca aagcctttaa
901 ccaatcctca acccttatta aacataagaa aattcatatt gaagagaaac ccttcaaatg
961 tgaagaatgt ggcaaagcct ttagtttatt ctcaatcctt agtaaacata agataattca
1021 tactggagac aaaccttaca aatgtgatga atgtcacaaa gcctttaact ggtttgcaac
1081 ccttactaac cataagagaa ttcatactgg agagaaaccc ttcaaatgtg aagaatgtgg
1141 caaaggcttt aaccagtttt caaaccttac taaacataag aaaattcata ctggagagaa
1201 accctacaaa tgtgaagaat gtggcaaagc ttttaaccag tttgcaaacc ttactagaca
1261 taagaaaatt catactggag agaaatccta caaatgtgaa gaatgcggca aagcttttat
1321 acagtcctca aaccttactg aacatatgag aattcatact ggagagaaac cctacaaatg
1381 tgaagaatgt ggcaaagctt ttaatgggtg ctccagcctt actcgacata agagaattca
1441 cactagagag aatacctaca aatgtgaaga atgtggcaaa ggctttactt tattttcaac
1501 ccttactaac cataaagtaa ttcatactgg agagaaatcc tacaaatgtg atgaatgtgg
1561 caatgttttt aactggcctg caactcttgc taatcataag agaattcatg ctagagagaa
1621 accctacaaa tgtgaagaat gtggcaaagc ttttaaccgg tcctcacacc ttactagaca
1681 taagaaaatt catactggtg agaaactcta caaacctgaa aaatgcgacg ataattttga
1741 taacacctaa aacttttcta aacataaaag acaccatcct gttgagaaac cctaaaaatg
1801 tgaagaattt gacaaagcct tccaatgatt gttacacttg cttgtaggta agataattta
1861 tattggagaa aactttataa gtgtaaagaa tgtgacaaaa cttaaccaat actcacatct
1921 tattgcacag gaaagcattt ttacttgaga aagattgtac aagtataaag aatgtgaaaa
1981 agtcattgat atcttttcac atcttactca acaccagagt ttatacttat taaaagcatt
2041 ataaatgcaa ttactgtcaa aagaaatttc agaaaacata acactttaaa gtgaagaagc
2101 atgtttattt tgaagacaaa cataacaaat ataaggagca taggagggtt gtagtacctt
2161 tacttgtatt acaaatctta ttgtacgcat tttgtactag agaaaaacac tgaagcagtt
2221 gctcaaactt tgttcaacat cagggaattt atattggaga aaaatcctgc aaatgtaatg
2281 aatttggaaa aacatttttt ttcaaaaact acggcgtaga aaacatgaat ttatattgaa
2341 atgtgttttt gcagatgcag taagtatgaa aaatatttaa tccaaaattg agtctatgta
2401 aatattaaat aatttacagt agaaataact aaggcactga cactttagac attacactaa
2461 aacagagtgt tgagtataaa aaaatctata agttgttaga ttatttgtaa ataactttaa
2521 aaggagtaga agattctttg gagagttata attacattga aagtatactt tttttcttga
2581 aaaaattatg gcttatttga aaagtaaata atgatgaaat tcaactctca aattacttta
2641 tttcattcct attgtattca catgtgaaag catgtgataa attgttgctg tgtcagatat
2701 aggagagatt cttttttatt agatgggcat tatttatggt tttttctgtg gaagagtatg
2761 ggcattaaaa tgtaaggttt atgatgaaaa tctaagtgga gaggccctgt tagtttactt
2821 ttcatattga gtgatgcatg aggtaggtgt ttggagtaat attctgcatc atagagaaaa
2881 gcatttttaa ttttacttta aattaaatgt aattaaatta ctagtgaatc attttactaa
2941 ttgtactttt atgctataaa tgcagtacat ttgaaaattt ttagattatg tataagctta
3001 attttataat taaacatttc tttaacaaaa aaaaaaaaaa aa
//