LOCUS BC030640 2865 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2, mRNA (cDNA clone MGC:26702 IMAGE:4821062), complete cds. ACCESSION BC030640 VERSION BC030640.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2865) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2865) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC030640.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: a Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2865 /db_xref="H-InvDB:HIT000041081" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26702 IMAGE:4821062" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2865 /gene="ATP6V1B2" /gene_synonym="ATP6B1B2" /gene_synonym="HO57" /gene_synonym="VATB" /gene_synonym="Vma2" /db_xref="GeneID:526" /db_xref="HGNC:HGNC:854" /db_xref="MIM:606939" CDS 27..1562 /gene="ATP6V1B2" /gene_synonym="ATP6B1B2" /gene_synonym="HO57" /gene_synonym="VATB" /gene_synonym="Vma2" /codon_start=1 /product="ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2" /protein_id="AAH30640.1" /db_xref="GeneID:526" /db_xref="HGNC:HGNC:854" /db_xref="MIM:606939" /translation="MALRAMRGIVNGAAPELPVPTGGPAVGAQEQALAVSRNYLSQPR LTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGT SGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINP QCRIYPEEMIRTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKD VVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI YERAGRVGGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPI NVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLL YLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDS AKH" BASE COUNT 727 a 610 c 687 g 841 t ORIGIN 1 gggtcagtcg ggacagagga gacaagatgg cgctgcgggc gatgcggggg attgtcaacg 61 gggccgcacc cgagctaccc gtgcccaccg gtgggccggc ggtgggagct caggagcagg 121 cgctggcagt cagtcggaac tacctctccc agcctcgcct cacatacaag acagtatctg 181 gagtcaatgg tccactagtg atcttagatc atgttaagtt tcccaggtat gctgaaattg 241 tccatttgac cttaccggat ggcacaaaga gaagtgggca agttctggaa gttagtggtt 301 ccaaggcagt agttcaggta tttgaaggga cttcaggtat agatgctaag aaaacgtcct 361 gtgagtttac tggggatatt ctccgaacac cggtgtctga ggatatgctt ggtcgggtat 421 tcaatggatc gggaaaaccc attgacagag gtcctgttgt actggccgaa gacttccttg 481 atatcatggg tcagccaatc aaccctcaat gtcgaatcta cccagaggaa atgattcgga 541 ctggcatttc ggccatcgat gggatgaaca gtattgctag ggggcagaaa attcctatct 601 tctctgctgc tgggctacca cacaatgaga ttgcagctca gatctgtcgc caggctggtt 661 tggtaaagaa atccaaagat gtagtagact acagtgagga aaattttgca attgtatttg 721 ctgctatggg tgtaaacatg gaaactgccc ggttcttcaa atctgacttt gaagaaaatg 781 gctcaatgga caatgtctgc ctctttttga acttggctaa tgacccaacc attgagcgaa 841 ttatcactcc tcgcctggct ctaaccacag ctgaatttct ggcgtaccaa tgtgagaaac 901 atgtattggt tattctaaca gacatgagtt cttatgctga agcacttcga gaggtttcag 961 cagccaggga agaggtacct ggtcgacgag gttttccagg ttacatgtat acagatttag 1021 ccacgatata tgaacgcgct gggcgagtgg gagggagaaa cggctcgatt actcaaatcc 1081 ctattctaac catgcctaat gatgatatca ctcaccccat cccagacttg actggctaca 1141 ttacagaggg gcagatctat gtggacagac agctgcacaa cagacagatt tatccaccta 1201 tcaatgtgct gccctcacta tcacggttaa tgaagtctgc tattggagaa gggatgacca 1261 ggaaggatca tgccgatgta tctaaccagc tatatgcgtg ctatgctatt ggaaaggatg 1321 tgcaagccat gaaagctgtc gttggagaag aagcccttac ctcagatgat cttctctact 1381 tggaatttct gcagaagttt gagaggaact tcattgctca gggtccttac gaaaatcgca 1441 ctgtctttga gactttggac attggctggc agctactccg aatcttcccc aaagaaatgc 1501 tgaagagaat ccctcagagc accctcagcg aattttaccc tcgagactct gcaaagcatt 1561 agctgctgct tctgcattgc tccgcgctct tgtgaaatac tggttctgtt ttctttattc 1621 cttttgcact ctcggttccc acctttgtgt tggagtttac catgttaccc tgtaattaaa 1681 aacaaagaat aggtaacata ttgtgccagt gttgcaacgt tttaaactgc taacagacct 1741 taaaatatcc ccctacctgg gtcctcagtg ctatgtttaa agtgctgcag ggatggagtg 1801 gcgttttctt attgctgtat gtattgtaca tagtggagta gttagttacc tgataacagt 1861 cttgttattt gggtctctta gaccttacct ctcaactccc tcaagagtac cagtctctga 1921 agttataatg ctttggtctc tacattaggg gcaagatcca gtctgagaga agtctccttt 1981 gagaagggcc aagaggctct ttcctgagtg tttgctttcg gtttgttggt atgcctgtat 2041 tgctgggctg tgctgctgct cgaagcagat ggttttgact gtctttttgc tctttcctat 2101 ataatgaata gatgagtgaa aggagttttc tttttctctt tagtacttac gtattgggat 2161 tcctgtgtct tacagctctc cctctccaaa taatacacag aatcctgcaa ctttttgcac 2221 agctggtatc tgtctggtag cagtgagacc ccttgtcttg gtgatcctta ctgggtttcc 2281 aagcagagga gtcacatgat tacaattgcc agtagagttg ttgtttgggg tacaagatga 2341 gaagaaagaa aaacctacag cctttctaca ttctgacatg ctaacagtgg tttaagtttc 2401 taaagtgttt accagatgct gaaggcaagg ggagggagca gaagcactta tgtttacgga 2461 tattttaaac tctgttagag agcagccttt gaaaatcccc aatttggttc tgctttttga 2521 cctctctcta ccttttcagg gtaatctttg tggcacaaac gatagcattt ccaagcttta 2581 gagttttctg aattcctgcg ccttcctgac gtgagccctg agcgatcttc tatgcagttc 2641 tgccatgcgt cctgttggtc tctctgtgtt ctttgttact tgggtgcaat agcaacttcc 2701 ctaccccgtg cattccatct ttcatgttgt gtaaagttct tcactttttt ctctgagggc 2761 tgggggttgg gggagtcagc atgattatat tttaatgtag aaaatgtgac atctggatat 2821 aaaatgaaaa taaatgttaa attaaatgga aaaaaaaaaa aaaaa //