LOCUS BC030639 1329 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens inhibitor of DNA binding 2, dominant negative
helix-loop-helix protein, mRNA (cDNA clone MGC:26389
IMAGE:4820416), complete cds.
ACCESSION BC030639
VERSION BC030639.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1329)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1329)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030639.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33946335.
FEATURES Location/Qualifiers
source 1..1329
/db_xref="H-InvDB:HIT000041080"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26389 IMAGE:4820416"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1329
/gene="ID2"
/gene_synonym="GIG8"
/gene_synonym="ID2A"
/gene_synonym="ID2H"
/gene_synonym="MGC26389"
/db_xref="GeneID:3398"
/db_xref="HGNC:HGNC:5361"
/db_xref="MIM:600386"
CDS 111..515
/gene="ID2"
/gene_synonym="GIG8"
/gene_synonym="ID2A"
/gene_synonym="ID2H"
/gene_synonym="MGC26389"
/codon_start=1
/product="inhibitor of DNA binding 2, dominant negative
helix-loop-helix protein"
/protein_id="AAH30639.1"
/db_xref="GeneID:3398"
/db_xref="HGNC:HGNC:5361"
/db_xref="MIM:600386"
/translation="MKAFSPVRSVRKNSLSDHSLGISRSKTPVDDPMSLLYNMNDCYS
KLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQNQASRTP
LTTLNTDISILSLQASEFPSELMSNDSKALCG"
BASE COUNT 415 a 288 c 262 g 364 t
ORIGIN
1 attctgagcc gagcccggtg ccaagcgcag ctagctcagc aggcggcagc ggcggcctga
61 gcttcagggc agccagctcc ctcccggtct cgccttccct cgcggtcagc atgaaagcct
121 tcagtcccgt gaggtccgtt aggaaaaaca gcctgtcgga ccacagcctg ggcatctccc
181 ggagcaaaac ccctgtggac gacccgatga gcctgctata caacatgaac gactgctact
241 ccaagctcaa ggagctggtg cccagcatcc cccagaacaa gaaggtgagc aagatggaaa
301 tcctgcagca cgtcatcgac tacatcttgg acctgcagat cgccctggac tcgcatccca
361 ctattgtcag cctgcatcac cagagacccg ggcagaacca ggcgtccagg acgccgctga
421 ccaccctcaa cacggatatc agcatcctgt ccttgcaggc ttctgaattc ccttctgagt
481 taatgtcaaa tgacagcaaa gcactgtgtg gctgaataag cggtgttcat gatttctttt
541 attctttgca caacaacaac aacaacaaat tcacggaatc ttttaagtgc tgaacttatt
601 tttcaaccat ttcacaagga ggacaagttg aatggacctt tttaaaaaga aaaaaaaaat
661 gtaaggaaaa ctaagaatga tcatcttccc agggtgttct cttacttgga ctgtgatatt
721 cgttatttat gaaaaagact tttaaatgcc ctttctgcag ttggaaggtt ttctttatat
781 actattccca ccatggggag cgaaaacgtt aaaatcacaa ggaattgccc aatctaagca
841 gactttgcct tttttcaaag gtggagcgtg aataccagaa ggatccagta ttcagtcact
901 taaatgaagt cttttggtca gaaattacct ttttgacaca agcctactga atgctgtgta
961 tatatttata tataaatata tctatttgag tgaaaccttg tgaactcttt aattagagtt
1021 ttcttgtata gtggcagaga tgtctatttc tgcattcaaa agtgtaatgg tgtacttatt
1081 catgctaaac tttttataaa agtttagttg taaacttaac ccttttatac aaaataaatc
1141 aagtgtgttt attgaatggt gattgcctgc tttatttcag aggaccagtg ctttgatttt
1201 tattatgcta tgttataact gaacccaaat aaatacaagt tcaaatttat gtagactgta
1261 taagattata ataaaacatg tctgaagtca aaaaaaaaaa aaaaaaaaaa aaagaaaaaa
1321 aaaaaaaaa
//