LOCUS BC030621 3051 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens zinc finger, FYVE domain containing 27, mRNA (cDNA clone MGC:33516 IMAGE:4818199), complete cds. ACCESSION BC030621 VERSION BC030621.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3051) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3051) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC030621.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: g Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50557647. FEATURES Location/Qualifiers source 1..3051 /db_xref="H-InvDB:HIT000041075" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33516 IMAGE:4818199" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3051 /gene="ZFYVE27" /gene_synonym="RP11-459F3.2" /db_xref="GeneID:118813" /db_xref="HGNC:HGNC:26559" /db_xref="MIM:610243" CDS 200..1435 /gene="ZFYVE27" /gene_synonym="RP11-459F3.2" /codon_start=1 /product="zinc finger, FYVE domain containing 27" /protein_id="AAH30621.2" /db_xref="GeneID:118813" /db_xref="HGNC:HGNC:26559" /db_xref="MIM:610243" /translation="MQTSEREGSGPELSPSVMPEAPLESPPFPTKSPAFDLFNLVLSY KRLEINLEPLKDAGDGVRYLLRWQMPLCSLLTCLGLNVLFLTLNEGAWYSVGALMISV PALLGYLQEVCRARLPDSELMRRKYHSVRQEDLQRVRLSRPEAVAEVKSFLIQLEAFL SRLCCTCEAAYRVLHWENPVVSSQFYGALLGTVCMLYLLPLCWVLTLLNSTLFLGNVE FFRVVSEYRASLQQRMNPKQEEHAFESPPPPDVGGKDGLMDSTPALTPTEDLTPGSVE EAEEAEPDEEFKDAIEETHLVVLEDDEGAPCPAEDELALQDNGFLSKNEVLRSKVSRL TERLRKRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAP EAQRETVFVCASCNQTLSK" BASE COUNT 611 a 842 c 934 g 664 t ORIGIN 1 gatttgcgtc ccggaagcgg cggtggcggc cgcggcgtag gcggaggaga ttttcggacc 61 tgcgacttcc gaacaaccct ggcaggagga gcggcgttca gccgggggag gcctgaagaa 121 acgctccggg gcccagtggc tctacccctg ctcctgcccg accctgccgc ctccctcacg 181 gagccagcgg ccgggtagga tgcagacatc agaacgtgag gggagtgggc cggagctgag 241 ccccagcgtg atgcccgagg ctcccctgga gtctccacct tttcctacca agtccccagc 301 gtttgacctt ttcaacttgg ttctctccta caagaggctg gagatcaacc tggaaccctt 361 gaaggatgca ggtgatggtg ttcgatactt gctcaggtgg cagatgcctt tgtgttcctt 421 gctgacctgc ctgggcctca acgtcttgtt cctcactttg aatgagggtg catggtactc 481 agtaggtgcc ctgatgattt cagtgcccgc cctgctgggc taccttcagg aggtttgccg 541 ggcacggctg cctgattccg agctgatgcg gaggaagtat catagcgtga ggcaggagga 601 cctgcagaga gttcgcctgt ctcgtcccga ggccgtggct gaggtgaaga gcttcttgat 661 ccagctggag gccttcctga gccgcctgtg ctgcacatgt gaagccgcct accgcgtgct 721 gcactgggag aaccccgtcg tgtcctcaca gttctatggg gctcttctgg gcacagtctg 781 catgctgtat ttgctgccac tctgctgggt tctcaccctt ttaaacagca cgctctttct 841 ggggaatgtg gagttcttcc gagttgtgtc tgagtacagg gcatctctgc agcagaggat 901 gaacccaaag caggaagagc atgcctttga gagtcctcca ccaccagatg ttggggggaa 961 ggatggtctg atggacagca cgcctgccct cacacccacg gaggacctca caccgggcag 1021 cgtggaggag gctgaggagg ctgagccaga tgaagagttt aaagatgcga ttgaggagac 1081 ccacttggtg gtgctggagg atgatgaggg cgccccgtgc ccagcagagg atgagctggc 1141 cctgcaggac aacgggttcc tgagcaagaa tgaggtgctg cgcagcaagg tgtctcggct 1201 cacggagcgg ctccgcaagc gctaccccac caacaacttc gggaactgca cgggctgctc 1261 ggccaccttc tcagtgctga agaagaggcg gagctgcagt aattgtggaa acagcttctg 1321 ctctcgatgc tgctccttca aggtgcccaa gtcatccatg ggggccacag cccctgaagc 1381 ccagagggag actgtgtttg tgtgtgcctc gtgtaaccag accttgagca agtgagaaga 1441 gaggccaggg tccaaccagg cacccgtcct tggggccagc agtagacccc ccactctccc 1501 cacccctggc ccactgtggt gtgtgctggg caaatgtggc ctgaatgcta ggtaggcttc 1561 cccttccttc ctcactctct ccagctggat tctggagctg ttctccatcc atgagagtgg 1621 ctggcaatgg ctgctctcaa tcccttgagg gagaagagcc cctggagggc ctggcatgtt 1681 tgccctgctc tgcctgggac tgagcgagtg gacttagggc tgggcaggca gtagccacca 1741 gagggcagca gcgaactagg ccaggcctga ctggggtctg aagatcaggg tcagtgtggc 1801 tatgcctggg aattccagac ctgaggttgg gaaaagaggt ttttctcctg cagggtactg 1861 ggccaggccc tcagcctcag agagcctgca gaagggcttg ggagtgccac accccatctc 1921 tgctgattga atgtccctcc aggcaccagg atctcatcat ttccccatca gagggtgtgg 1981 ccaggcctaa caagaccatg ggtgcttcta gaaacagggt tgaagttccc agattccctg 2041 agaggagaat gtgtatagga gggtttggct gagtccttca gcgttaagtg gaggaaagct 2101 tggggaagcc ccaatagctg gacagacctc agcctcccct cgaagacacc tcaattcaca 2161 gactctcagc ccacacaatg ccccagtgtc cccagctccg ctggagcagc tgcagggcac 2221 ttggatcaca acttctgcac cctctgtcca gagtctaggg cagtcctcca ctggcccagc 2281 actccagttt cctttccctg cctcttgtcc aatggagtgg gaggccaggt gagtggagca 2341 gaggtcctga agcccttgac ccctgggggc ctgggtagtg taggatctcg ctgggctggg 2401 tcctggattc cagggctatt ccctggagga cagtctcagt tatgggataa ggccccctgg 2461 gggtctccat ttctttccaa cagtttcatg ttcactactg gactcttacg ggctcagtat 2521 ctctccctta gccatgagct ggctcaggca tcccttccct tccctggagc tgccctgcct 2581 ttctcaagta tttatttatt tattgcatgg ttcctgggaa catgtggcac aagtaatggg 2641 atgaggagga attgggggtg ggggtcttct acctaggact cttccctgga gtcatgggct 2701 gcctgggacc caggacccat gagggggctg agaggtttct acactcgagg agcaggggtc 2761 cagagaggca ggctggggag gcaagggacc catcctaggc ccgctttctt gccgagccaa 2821 gcagcttagc tggggctgtg cagccagggg cttacccagg ccagtggagg tgccacagcc 2881 ctggggagcc agacaggctt tggtatcgta tcgcctctgt gtccttttaa gagaggagag 2941 ttcagtaccc cgtgctttct ttacactgga gaggaactaa aaggatctct gtgtctatgg 3001 agaattgtca ataaaaaggc ctcaagcttc aaaagaaaaa aaaaaaaaaa a //