LOCUS BC030616 1530 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens ataxin 7-like 1, mRNA (cDNA clone MGC:33190
IMAGE:4796569), complete cds.
ACCESSION BC030616
VERSION BC030616.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1530)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1530)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC030616.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059760.
FEATURES Location/Qualifiers
source 1..1530
/db_xref="H-InvDB:HIT000041073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33190 IMAGE:4796569"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1530
/gene="ATXN7L1"
/db_xref="GeneID:222255"
/db_xref="HGNC:HGNC:22210"
CDS 25..465
/gene="ATXN7L1"
/codon_start=1
/product="ataxin 7-like 1"
/protein_id="AAH30616.1"
/db_xref="GeneID:222255"
/db_xref="HGNC:HGNC:22210"
/translation="MTSERSRIPCLSAAAAEGTGKKQQEGRAMATLDRKVPSPEAFLG
KPWSSWIDAAKLHCSDNVDLEEAGKEGGKSREVMRLNKEDMHLFGHYPAHDDFYLVVC
SACNQVVKPQVFQSHCGRKQDNRRNEGISRSGPESSQAIEKHQV"
BASE COUNT 458 a 356 c 338 g 378 t
ORIGIN
1 actcaatgtc ggaacgttcc gaagatgacg tcggagcgtt ctcgaatccc gtgtctctcg
61 gctgctgctg ccgaaggaac agggaaaaag caacaagaag gaagagcaat ggcgacactg
121 gatcgcaaag tgcccagtcc ggaggcgttt ctgggcaaac cctggtcctc ctggatcgac
181 gccgccaaat tacactgctc cgacaatgta gatttagaag aggctggaaa agagggtgga
241 aaaagcaggg aggttatgag gcttaataaa gaagatatgc acttatttgg ccattaccca
301 gcacatgacg acttctatct cgtagtgtgc agtgcctgta accaggtcgt caagccacag
361 gttttccagt cgcactgcgg gagaaagcaa gacaacagga gaaatgaagg catctccagg
421 agtggaccag agagcagcca agccatagag aagcatcagg tgtgagaatg gaaaacgcag
481 aagagacgta caacttctga aagatctcag aggactggca ttgtctggag acggcttcct
541 ggaagaggag actccagcag agccctgaag tgtggacaag cttccattca ctgcaaattc
601 gtgagcacac tctggtgtca ggatctagta aggaaatggg cttgagcaga gcagggggta
661 cctgtggggt tcttctcttc attttcacca ccacaaagct ggtctaagct gccatcaatt
721 cccacctgga caactgcaaa agccttccag ctgttcctgc ttccactctt gctcctctac
781 aattcattct gcacgcagaa gtcagaatca aaatcaaagt tcatcatgtc attctcttga
841 cttgtggctt ccctttgctc ttaagctaaa agtaaaaatc attatcatgg ctacaaagtc
901 ttgtgtggtc tgggccacat cctgtgccag gctccctttc attgtctata ttccagtcaa
961 gctggccttc aaaatttcag cacattgggt ctttctgcca caggcccttg cacatacatg
1021 cttttccctc tgtacatgtg attttctttc atccccgctt tccaaagcta actctgactc
1081 atccttcaga ctgcatctta atgattactt ccttctggaa gactccccta attttcacaa
1141 ctagatgagc tctcccttat atgttgaaaa caagtatttc ttgtgtgaac agaaatgttt
1201 aatgtctgcc ttcccaactc agccacaagc tctgtgagga tggggactca gtctttgcat
1261 ccctcagagc ctagcatagt ctcagttaat acgtgatagc tggagcgtga catttcatta
1321 ggaacagtga ggctagttga gaaattatac ctcaccagta tataggagag taccattagg
1381 aattcttaat gggatgaaaa cctgaattca tgtctagacc ctgccacctg ctggctgtgc
1441 tgttttaaat aaattgcaga tcctctcaga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaagaaaaaa aaaaaaaaaa
//