LOCUS BC030589 3257 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 1 family, member A2, mRNA (cDNA
clone MGC:26444 IMAGE:4826743), complete cds.
ACCESSION BC030589
VERSION BC030589.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3257)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3257)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC030589.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: o Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777723.
FEATURES Location/Qualifiers
source 1..3257
/db_xref="H-InvDB:HIT000041057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26444 IMAGE:4826743"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3257
/gene="ALDH1A2"
/gene_synonym="MGC26444"
/gene_synonym="RALDH(II)"
/gene_synonym="RALDH2"
/gene_synonym="RALDH2-T"
/db_xref="GeneID:8854"
/db_xref="HGNC:HGNC:15472"
/db_xref="MIM:603687"
CDS 32..1474
/gene="ALDH1A2"
/gene_synonym="MGC26444"
/gene_synonym="RALDH(II)"
/gene_synonym="RALDH2"
/gene_synonym="RALDH2-T"
/codon_start=1
/product="aldehyde dehydrogenase 1 family, member A2"
/protein_id="AAH30589.1"
/db_xref="GeneID:8854"
/db_xref="HGNC:HGNC:15472"
/db_xref="MIM:603687"
/translation="MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINN
EWQNSESGRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASER
GRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGM
TIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLS
ALYMGALIKEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFF
NQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKIL
ELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKT
MDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKM
SGNGREMGEFGLREYSEVKTVTVKIPQKNS"
BASE COUNT 886 a 743 c 760 g 868 t
ORIGIN
1 ggcgcgggct agggacaccc ggcccgccac catgacttcc agcaagatag agatgcccgg
61 cgaggtgaag gccgaccccg ccgccctcat ggcgtcgctg cacctcctgc cgtcgcccac
121 gcccaatctc gaaattaagt acaccaagat ctttataaac aacgagtggc agaactcaga
181 gagtgggaga gtgttccctg tctataatcc agccacagga gaacaggtgt gtgaagttca
241 agaagcagac aaggcagata tagacaaagc agtgcaggca gcccgcctgg ctttctctct
301 tggttcagtg tggagaagga tggatgcttc agaaagggga cgtctgttgg ataagcttgc
361 agacttggtg gaacgggaca gggcagttct tgcaaccatg gaatccctaa atggtggcaa
421 accattcctg caagcttttt atgtggattt gcagggcgtc atcaaaacct ttcgatatta
481 cgcaggctgg gctgataaaa ttcatgggat gaccattcct gtagatggag actattttac
541 ctttacaaga catgaaccca ttggagtgtg tggacagatc atcccatgga acttccccct
601 gctgatgttt gcctggaaaa tagctccagc tttgtgctgt ggcaatacag tagttattaa
661 gccagcagag caaacaccac tcagtgcact ctacatggga gccctcatca aggaggttgg
721 aaagcttatc caagaagcag ctggaagaag taatttgaag agagtaactc tggaacttgg
781 aggcaaaagt cctaatatta tttttgctga tgctgacttg gactatgctg tggagcaggc
841 ccaccagggt gtgttcttca atcaaggtca gtgctgcact gcaggctctc gcatcttcgt
901 ggaggagtcc atctatgagg agtttgtgag aagaagcgtg gagcgggcca agaggcgcgt
961 agtggggagt ccctttgacc ccaccactga gcagggtccc cagattgata agaaacagta
1021 caacaagatc ttggaactca tccagagtgg tgtggctgag ggcgccaagc tggaatgtgg
1081 aggcaaagga ctgggccgaa aggggttttt cattgagccc acagtgtttt ccaacgtcac
1141 tgatgatatg cggattgcca aggaggagat ctttggccct gttcaggaaa ttttgagatt
1201 taagacgatg gatgaagtta tcgaaagagc caataactca gactttggac tcgtagcagc
1261 tgtctttact aatgacatca acaaggccct cacagtgtct tctgcaatgc aagctgggac
1321 tgtttggatc aattgttaca atgccttaaa tgcccagagc ccctttgggg gattcaagat
1381 gtctggaaat gggagagaaa tgggagaatt tggcttgcgg gagtactcag aagttaagac
1441 ggtgacagta aagatccccc agaagaactc ctaagaaggc caagaaggag gatgaagccc
1501 agcctgcacg tctgtccctc tctgctttct ctgtagggcc cagctctcag gaatacaaag
1561 ttgagccacg gtccttactt aaagattgaa aagataacat gtaggccagg caggtcactg
1621 cacaactaaa gcaaaccagc tgggtacagt ttcttggcac tctgtaaggg gccaccttaa
1681 tcataccaaa tattggggaa agtgggataa agggaggagg aggagctagc agacacatcc
1741 agtatctcct tctggagcac aggatgaaat aagggagctg tattatttca tgtctttgtc
1801 acaaagaact ttcctctcaa ggaaaggtga cctttctcct gtcttcattt tcctccttcc
1861 aggccctcct cgctcaccca cccctccctc tcttccaagg agatgtcagc tgagctcatt
1921 ctggggcaga tgtttgggcc gggaacaatt tttcaaggtt gtaaagccaa attatcattt
1981 catgttatcc atttcttcaa agcaaaacat gaaatggttt tagctagagt cagaccagaa
2041 tgaaaatgcc aggagctggt acactacaga tgtagtaaga acctgggata ttcctgaccc
2101 aatctggttt tcttttaccc ataaataaca tgaatgaaaa aagattggga caatagagac
2161 tggaagtcat catgtgcagt tcaccgcttc tgagcttgct gcagttttgg ggtgtgtgtg
2221 tattagattc cttctcagtt attctggaat aaggcaagga gtgggttgtt tttcatagct
2281 agataagatc ttttccaaag tttttcttag aaccaaccaa aaaacaatcc gagtaggccc
2341 aagaatttga taatgctgga tgccttgcag acatcattca gtttctaata ttgggcaaca
2401 attattatta aatgaattat ttctgtagtt ggaatctgta ccttctgaac ctctacacca
2461 ataactgctg caggtgtgat tttggtctgt cacactgtac atctatcata atgtgccctg
2521 tatctattgg cagtgacctt ggaaaatctg gccaagccta ggggtttcct tttccatttg
2581 ccaagttcca ttgtgccagg actgccgtgc tccactgagc tcctctgtca caccccattc
2641 ttgcccctca ctgggcaggc catggcctac agcttgcagg gagtaaagca ggcccgcctc
2701 cctttcttcc catccacata ctcctcttct gctttccagt gactccacca gtttgatgtg
2761 ggaagtgtta gcttcctttc cttcttccat cccttcttcc atctttccag ctgtcaaatc
2821 caatccagtc tctaacctaa atgcagatca tttatttaaa agtaccaaac ataacccaga
2881 gtatgtggaa tatgggcaac atatatatag ccttctgtat ttaacgatct tctgcttctt
2941 aaccgtacca gttttctatt tataactctt atctatccat gatgttttaa agtctccact
3001 tgctgttatt tacaaacgac agtgcattca gcagcccagt gccgtgagcc ctgacagatg
3061 ccgtatttct gagtgcttcc atgtgaatgc tgccctcctg tagcatgtgt ccaagtggac
3121 atagccacta accaactagt tacctttgga ctgcaacaaa aaatgtgaaa atgaagattt
3181 atttctttta atttacttaa aaagaaacct ctgtgctagc aataaagcat ttatattgtg
3241 caaaaaaaaa aaaaaaa
//