LOCUS BC030529 2653 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
4, mRNA (cDNA clone IMAGE:5211555), with apparent retained intron.
ACCESSION BC030529
VERSION BC030529.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2653)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110940
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2653
/db_xref="H-InvDB:HIT000092136"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5211555"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 735 a 581 c 593 g 744 t
ORIGIN
1 tcggtgagcg gtggtggttt attcttccgc ggagttaagg gctccgtgga catctcaggt
61 cttcagggtc ttccatctgg tgagcctttg gccccttggg gcccgcggaa gcttggccgc
121 tttcccattg ggcgggggtc gtgaacgtca agacagtcgg tcccggcctg cagttgccgc
181 cgaggagccg tgggcacgat gactctgcac cgcctcctct gtgacggacc gacagccggg
241 aatggccccc gccggccgcc gtcgggggct tcccagtgcc aagcctggac gccggggccc
301 gcgagggggc gggctgaggg tgggggtctg tgggcaggac cgagagttgg ggtggcttcc
361 gtcctcagga gttcggtacg tgaaagttag ctctcccgga ggtgccggtg aactcaaaat
421 cgtgctgtgc ccggcgtcag gcgtggagac aacagaaagt tgtgcttaaa gcccggcgag
481 tgtctctgtg tcctccctgc ttctctgctc tgtgccatcc ttactttgca ccattcctat
541 tgcaattacc tcaaccagtt cgctgccctc ggtctctcac cagccagagt gatcatttaa
601 aatgccaatc agttcctgtg ggccttggga ataatccaga ggagccccat tggctgagag
661 ataaaattct gtttttacct gggcacgcgg gctctccagg atttgattcc agcttacctt
721 tccagtcttg attccctata ttccagtatt tggaaatgtg ggcattggac tgaggcttta
781 ccaaataacg ctgagcacct agtattgcct tttgcacgaa tggtactgat ggtgcccaag
841 ataactgcct ccacccccaa gttcaggacc cagatcactc tctggagaag gcctcagcct
901 cttgccttgg ctttcaaggc tctgcgtgat ttggatactc acttagctct tatttatata
961 tattttaaaa gcatcagcag tttatctcat gcccactaaa ctatcctgcc tcggtaccct
1021 ttgttcatac tttctgctct gtgtggaatg cccttctttc ttcccctgtt ctttctctta
1081 gacccaaggg ttctcagcct tatttctgcc tctcccatct ctgatttact ttcattttct
1141 gtatcgattt ctcaaaaaat actttcttga ttctttcatc atcccttttc ccaccctacc
1201 cccggttcct ctttccacat tataatctat gactgcctct ctcacctaac tgccagtatt
1261 agcttttcag gacaggaact ggttttacac attttggtat tccagcatct agcataatgc
1321 ctgacactta gctgaataaa gggagtaaat aaaacagatt tgtaaagtca gcaaatgctt
1381 tttaatttgt gaatcttatt ttaatgatga tctgattttc tttttacagg aactatataa
1441 agttcagaaa acatggtgag ttaatacaca tgccaataaa cggttgcctg ataaacagta
1501 ttgcttgtac tcagtttaca gacttgagtg ggaaaattga aatagaagga aagcagtgag
1561 aaggtgcctt ttttcttgtc agtttcctct cacctattga actttgtata ccaggatagg
1621 ttttgtaaga tcatttgtag gcttgcagga gttggcctac tttcagtggg taggaatcac
1681 tcatgtgttt ttcctttgca gtctcgaaga tatgactcca ggaccactat attttctcca
1741 gaagggacat ggcttgcagt gtggcaggca taacttctga tgctaatgtt ctgactaatg
1801 aactaaggct cattgctcaa aggtatttat tacagtatca ggagccaata ccttgtgagc
1861 agttggttac agcgctgtgt gatatcaaac aagcttatac acaatttgga ggaaaacgtc
1921 cctttggtgt ttcattgctg tacattggct gggataagca ctatggcttt cagctctatc
1981 agagtgaccc tagtggaaat tacgggggat ggaaggccac atgcattgga aataatagcg
2041 ctgcagctgt gtcaatgttg aaacaagact ataaagaagg agaaatgacc ttgaagtcag
2101 cacttgcttt agctatcaaa gtactaaata agaccatgga tgttagtaaa ctctctgctg
2161 aaaaagtgga aattgcaaca ctaacaagag agaatggaaa gacagtaatc agagttctca
2221 aacaaaaaga agtggagcag ttgatcaaaa aacacgagga agaagaagcc aaagctgagc
2281 gtgagaagaa agaaaaagaa cagaaagaaa aggataaata gaatcagaga ttttattact
2341 catttggggc accatttcag tgtaaaagca gtcctactct tccacactag gaaggcttta
2401 ctttttttaa ctggtgcagt gggaaaatag gacattacat actgaattgg gtccttgtca
2461 tttctgtcca attgaatact ttattgtaac gatgatggtt acccttcatg gacgtcttaa
2521 tcttccacac acatcccctt tttttggaat aaaatttgga aaatggaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaa
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