LOCUS BC030506 1532 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens germinal center expressed transcript 2, mRNA (cDNA
clone MGC:40441 IMAGE:4385178), complete cds.
ACCESSION BC030506
VERSION BC030506.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1532)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1532)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57165368.
FEATURES Location/Qualifiers
source 1..1532
/db_xref="H-InvDB:HIT000041018"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40441 IMAGE:4385178"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1532
/gene="GCET2"
/gene_synonym="GCAT2"
/gene_synonym="HGAL"
/gene_synonym="MGC40441"
/db_xref="GeneID:257144"
/db_xref="HGNC:HGNC:20253"
/db_xref="MIM:607792"
CDS 54..590
/gene="GCET2"
/gene_synonym="GCAT2"
/gene_synonym="HGAL"
/gene_synonym="MGC40441"
/codon_start=1
/product="germinal center expressed transcript 2"
/protein_id="AAH30506.1"
/db_xref="GeneID:257144"
/db_xref="HGNC:HGNC:20253"
/db_xref="MIM:607792"
/translation="MGNSLLRENRRQQNTQEMPWNVRMQSPKQRTSRCWDHHIAEGCF
CLPWKKILIFEKRQDSQNENERMSSTPIQDNVDQTYSEELCYTLINHRVLCTRPSGNS
AEEYYENVPCKAERPRESLGGTETEYSLLHMPSTDPRHARSPEDEYELLMPHRISSHF
LQQPRPLMAPSETQFSHL"
BASE COUNT 459 a 354 c 313 g 406 t
ORIGIN
1 ccacgcgtcc ggtggtaaag ggacggaggg gaagccctga gaggactgag aggatgggaa
61 attctctgct gagagaaaac aggcggcagc agaacactca agagatgcct tggaatgtga
121 gaatgcaaag ccccaaacag agaacatcca gatgctggga tcaccatatc gctgaagggt
181 gtttctgcct tccatggaaa aaaatactca tttttgaaaa gaggcaagat tcccaaaacg
241 aaaatgaaag aatgtcatct actcccatcc aggacaatgt tgaccagacc tactcagagg
301 agctgtgcta taccctcatc aatcatcggg ttctctgtac aaggccatca gggaactctg
361 ctgaagagta ctatgagaat gttccctgca aagctgagag acccagagag tccttgggag
421 gaactgagac tgagtattca cttctacata tgccttctac agaccccagg catgcccgat
481 ccccagaaga tgaatatgaa cttctcatgc ctcacagaat ctcctctcac tttctgcaac
541 agccacgtcc acttatggcc ccttctgaga ctcagttttc ccatttatag tgaagtggct
601 ggactagcat ttgtttagca ccaacaaata aaaggtggga tgggggatct gcctgaagca
661 gggatgggac acaaagtccc tccagcttat ctcccacaac aaccctttcc ctgcagagca
721 tggtttgtat accacaagcc ctcttagcac gcaaaagcca aaatctaaag atcaaccatt
781 tatcctgaac aacaccattt gagaaagagg taaccatctt tggttctaca tggtttggag
841 agtatagtgg taggaggggc tccctgattc ccctaaagct atgcacacca caaggggctc
901 tgctcttctg tctgggatct tcttataaag tgttcccatg atcattctct aaagtcacga
961 ggaagcttta ctcatcatac taagtgtgcc caagggggag ttcactcatt actgtgacct
1021 tccagctcag tccccaccca tgggagcctg tgttgctcct ctcactccat gtgtctaagt
1081 catgtctttt acatagtgtc ctttgacctg ttggccccca tggtctggtt agttatgtga
1141 gttgaatcaa gaggctctag gccagatgtt tacataattt taacctatat gattttattt
1201 ttaactttgt atttctccct agaaatctta ataagacaat tatgccatca gacaatgtta
1261 agaagaacga tccttggaga tcccgtaatc ccactaccct tctttggctc agagaggata
1321 atttgcctaa tgatacatta aagttagtgg caaaacttaa tttggagcct gatttcctac
1381 tgacttccaa tttagtgctc ccccagtatg ctaaatagaa agccctctgc aatatattaa
1441 atgtatacta aatgtatata tttaataatg tcatgtataa aatatgaata aaatgtccac
1501 ataggaaatt aacacataaa aaaaaaaaaa aa
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