LOCUS BC030289 572 bp mRNA linear HUM 23-JUL-2007 DEFINITION Homo sapiens SIX homeobox 3, mRNA (cDNA clone IMAGE:5405743), partial cds. ACCESSION BC030289 VERSION BC030289.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 572) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 572) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: p Column: 10. FEATURES Location/Qualifiers source 1..572 /db_xref="H-InvDB:HIT000092120" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5405743" /tissue_type="Liver, adenocarcinoma" /clone_lib="NIH_MGC_90" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>572 /gene="SIX3" /db_xref="GeneID:6496" /db_xref="HGNC:HGNC:10889" /db_xref="MIM:603714" CDS 32..>572 /gene="SIX3" /codon_start=1 /product="SIX3 protein" /protein_id="AAH30289.1" /db_xref="GeneID:6496" /db_xref="HGNC:HGNC:10889" /db_xref="MIM:603714" /translation="MVFRSPLDLYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGA GGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEET GDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKE SHGKLQAMWLEAHYQEAEKL" BASE COUNT 90 a 199 c 192 g 91 t ORIGIN 1 ccacgcgtcc gctctcctct caggtcagtc catggtattc cgctcccccc tagacctcta 61 ttcctcccac ttcttgttgc caaacttcgc cgattctcac caccgctcca tacttctggc 121 gagtagcggc ggcgggaacg gtgcgggagg cggcggcggc gcgggaggcg gcagcggcgg 181 cgggaacggt gcgggaggcg gcggtgctgg cggagcaggc ggcggcggcg gcggcggctc 241 cagggccccc ccggaagagt tgtccatgtt ccagctgccc accctcaact tctcgccgga 301 gcaggtggcc agcgtctgtg agacgctgga ggagacgggc gacatcgagc ggctgggccg 361 cttcctctgg tcgctgcccg tggcccccgg ggcgtgcgag gccatcaaca aacacgagtc 421 gatcctgcgc gcgcgcgccg tggtcgcctt ccacacgggc aacttccgcg acctctacca 481 catccttgag aaccacaagt tcaccaagga gtctcacggc aagctgcagg ccatgtggct 541 cgaggcgcac taccaggagg ccgagaagct gc //