LOCUS BC030234 3141 bp mRNA linear HTC 19-MAR-2007
DEFINITION Homo sapiens retinoic acid receptor, beta, mRNA (cDNA clone
IMAGE:5229160), containing frame-shift errors.
ACCESSION BC030234
VERSION BC030234.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3141)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3141)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14916493
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..3141
/db_xref="H-InvDB:HIT000092091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5229160"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 986 a 663 c 633 g 859 t
ORIGIN
1 tgcgagctgt ttgaggactg ggatgccgag aacgcgagcg atccgagcag ggtttgtctg
61 ggcaccgtcg gggtaggatc cggaacgcat tcggaaggct ttttgcaagc atttacttgg
121 aaggagaact tgggatcttt ctgggaaccc cccgccccgg ctggattggc cgagcaagcc
181 tggaaaatgg taaatgatca tttggatcaa ttacaggctt ttagctggct tgtctgtcat
241 aattcatgat tcggggctgg gaaaaagacc aacagcctac gtgccaaaaa aggggcagag
301 tttgatggag ttgggtggac ttttctatgc catttgcctc cacacctaga ggataagcac
361 ttttgcagac attcagtgca agggagatca tgtttgactg tatggatgtt ctgtcagtga
421 gtcctgggca aatcctggat ttctacactg cgagtccgtc ttcctgcatg ctccaggaga
481 aagctctcaa agcatgcttc agtggattga cccaaaccga atggcagcat cggcacactg
541 ctcaatcaat tgaaacacag agcaccagct ctgaggaact cgtcccaagc cccccatctc
601 cacttcctcc ccctcgagtg tacaaaccct gcttcgtctg ccaggacaaa tcatcagggt
661 accactatgg ggtcagcgcc tgtgagggat gtaagggctt tttccgcaga agtattcaga
721 agaatatgat ttacacttgt caccgagata agaactgtgt tattaataaa gtcaccagga
781 atcgatgcca atactgtcga ctccagaagt gctttgaagt gggaatgtcc aaagaatctg
841 tcaggaatga caggaacaag aaaaagaagg agacttcgaa gcaagaatgc acagagagct
901 atgaaatgac agctgagttg gacgatctca cagagaagat ccgaaaagct caccaggaaa
961 ctttcccttc actctgccag ctgggtaaat acaccacgaa ttccagtgct gaccatcgag
1021 tccgactgga cctgggcctc tgggacaaat tcagtgaact ggccaccaag tgcattatta
1081 agatcgtgga gtttgctaaa cgtctgcctg gtttcactgg cttgaccatc gcagaccaaa
1141 ttaccctgct gaaggccgcc tgcctggaca tcctgattct tagaatttgc accaggtata
1201 ccccagaaca agacaccatg actttctcag acggccttac cctaaatcga actcagatgc
1261 acaatgctgg atttggtcct ctgactgacc ttgtgttcac ctttgccaac cagctcctgc
1321 ctttggaaat ggatgacaca gaaacaggcc ttctcagtgc catctgctta atctgtggag
1381 accgccagga ccttgaggaa ccgacaaaag tagataagct acaagaacca ttgctggaag
1441 cactaaaaat ttatatcaga aaaagacgac ccagcaagcc tcacatgttt ccaaagatct
1501 taatgaaaat cacagatctc cgtagcatca gtgctaaagg tgcagagcgt gtaattacct
1561 tgaaaatgga aattcctgga tcaatgccac ctctcattca agaaatgctg gagaattctg
1621 aaggacatga acccttgacc ccaagttcaa gtgggaacac agcagagcac agtcctagca
1681 tctcacccag ctcagtgaaa acagtggggt cagtcagtca ccactcgtgc aataagacat
1741 tttctagcta cttcaaacat tccccagtac cttcagttcc aggatttaaa atgcaagaaa
1801 aaacattttt actgctgctt agtttttgga ctgaaaagat attaaaactc aagaaggacc
1861 aagaagtttt catatgtatc aatatatata ctcctcactg tgtaacttac ctagaaatac
1921 aaacttttcc aattttaaaa aatcagccat ttcatgcaac cagaaactag ttaaaagctt
1981 ctattttcct ctttgaacac tcaagattgc atggcaaaga cccagtcaaa atgatttacc
2041 cctggttaag tttctgaaga ctttgtacat acagaagtat ggctctgttc tttctatact
2101 gtatgtttgg tgctttcctt ttgtcttgca tactcaaaat aaccatgaca ccaaggttat
2161 gaaatagact actgtacacg tctacctagg ttcaaaaaga taactgtctt gctttcatgg
2221 aatagtcaag acatcaaggt aaggaaacag gactattgac aggactattg tacagtatga
2281 caagataagg ctgaagatat tctactttag ttagtatgga agcttgtctt tgctctttct
2341 gatgctctca aactgcatct tttatttcat gttgcccagt aaaagtatac aaattccctg
2401 cactagcaga agagaattct gtatcagtgt aactgccagt tcagttaatc aaatgtcatt
2461 tgttcaattg ttaatgtcac tttaaattaa aagtggttta ttacttgttt aatgacataa
2521 ctacacagtt agttaaaaaa aattttttta cagtaatgat agcctccaag gcagaaacac
2581 ttttcagtgt taagtttttg tttacttgtt cacaagccat tagggaaatt tcatgggata
2641 attagcaggc tggtctacca cctggaccat gtaactctag tgtccttcct gattcatgcc
2701 tgatattggg attttttttt ccagccttct tgatgccaag gggctaatta atattaacaa
2761 ctcccaaaga aacaggcata gaatctgcct cctttgacct tgttcaatca ctatgaagca
2821 gagtgaaagc tgtggtagag tggttaacag atacaagtgt cagtttctta gttctcattt
2881 aagcactagt ggaatttttt ttttttgata tattagcaag tctgtgatgt actttcactg
2941 gctctgtttg tacattgaga ttgtttgttt aacaatgctt tctatgttca tatactgttt
3001 acctttttcc atggagtctc ctggcaaaga ataaaatata tttattttaa aaaaaaaaaa
3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3121 aaaaaaaaaa aaaaaaaaaa a
//